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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 5
  • vacuole 4
  • plasma membrane 7
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G13800.3 Thale cress plasma membrane 83.55 86.19
Bra041056.1-P Field mustard plasma membrane 70.0 83.95
CDY48450 Canola plasma membrane 82.26 83.33
CDX89615 Canola plasma membrane 81.45 82.79
CDX93126 Canola plasma membrane 81.13 82.46
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 67.1 80.31
CDX71165 Canola plasma membrane 80.0 80.26
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 67.42 79.62
Bra032128.1-P Field mustard cytosol 62.42 79.47
Solyc10g047140.1.1 Tomato plasma membrane 77.74 78.37
Solyc01g104970.2.1 Tomato plasma membrane 77.1 77.6
AT4G33430.2 Thale cress plasma membrane 80.81 75.68
VIT_12s0055g01280.t01 Wine grape plasma membrane 62.58 75.63
VIT_12s0055g01160.t01 Wine grape plasma membrane 74.35 75.57
Bra032125.1-P Field mustard plasma membrane 65.32 75.42
AT1G71830.1 Thale cress plasma membrane 75.16 74.56
GSMUA_Achr7P17210_001 Banana cytosol 58.87 74.04
AT1G34210.1 Thale cress plasma membrane 74.84 73.89
TraesCS6D01G186900.2 Wheat plasma membrane 71.61 73.51
TraesCS6A01G203600.2 Wheat cytosol 71.94 73.23
KRH58311 Soybean plasma membrane 73.06 72.95
CDY39690 Canola cytosol 70.97 72.49
GSMUA_Achr2P14850_001 Banana plastid 73.06 72.48
GSMUA_Achr10P... Banana plasma membrane 73.06 72.36
Os08t0174700-01 Rice plasma membrane 72.74 72.28
Os04t0457800-01 Rice plasma membrane 73.06 72.13
GSMUA_AchrUn_... Banana plasma membrane 73.23 72.06
KXG24562 Sorghum plasma membrane 73.23 71.95
TraesCS2B01G340700.1 Wheat plasma membrane 72.74 71.93
TraesCS7D01G291200.3 Wheat plasma membrane 71.94 71.82
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 72.58 71.77
EES07030 Sorghum plasma membrane 72.42 71.73
TraesCS2D01G321400.1 Wheat mitochondrion 72.42 71.61
Zm00001d016928_P010 Maize plasma membrane 72.26 71.57
TraesCS7A01G293300.3 Wheat plasma membrane 71.77 71.54
TraesCS6B01G223700.3 Wheat plasma membrane 72.26 71.34
Zm00001d050868_P004 Maize plasma membrane 71.61 71.27
TraesCS7B01G182300.1 Wheat plasma membrane 71.45 71.22
HORVU6Hr1G049080.7 Barley plasma membrane 72.1 71.18
Zm00001d024430_P002 Maize plasma membrane 73.23 71.16
EES12285 Sorghum plasma membrane 71.29 71.06
Zm00001d025580_P001 Maize plasma membrane 71.13 70.9
GSMUA_Achr7P11620_001 Banana plasma membrane 73.06 70.45
Bra013136.1-P Field mustard plasma membrane 65.16 69.9
HORVU7Hr1G068990.2 Barley mitochondrion 72.1 66.32
KRH42193 Soybean plasma membrane 65.48 65.91
Zm00001d049480_P005 Maize plasma membrane 69.84 65.71
KRH58312 Soybean plasma membrane 63.87 64.39
GSMUA_Achr10P... Banana mitochondrion 74.84 64.0
HORVU2Hr1G080020.6 Barley cytosol 72.42 63.42
Os06t0225300-01 Rice plasma membrane 56.13 56.49
AT5G10290.1 Thale cress plasma membrane 50.81 51.39
AT5G16000.1 Thale cress plasma membrane 50.81 49.37
AT1G60800.1 Thale cress plasma membrane 50.32 49.37
AT5G65240.2 Thale cress plasma membrane 49.35 47.81
AT3G25560.3 Thale cress plasma membrane 49.03 46.99
AT4G30520.1 Thale cress plasma membrane 47.1 45.06
AT2G23950.1 Thale cress plasma membrane 45.97 44.95
AT5G45780.1 Thale cress plasma membrane 44.03 44.46
AT5G63710.3 Thale cress plasma membrane 43.39 43.74
AT1G78530.1 Thale cress plasma membrane, vacuole 20.32 35.49
AT2G35620.3 Thale cress plasma membrane 31.13 32.77
AT1G31420.3 Thale cress plasma membrane 30.81 32.26
AT5G62710.1 Thale cress plasma membrane 31.13 31.95
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:815862ProteinID:AAD28318.1
ProteinID:AEC06259.1EMBL:AK226573ArrayExpress:AT2G13790EnsemblPlantsGene:AT2G13790RefSeq:AT2G13790TAIR:AT2G13790
RefSeq:AT2G13790-TAIR-GEnsemblPlants:AT2G13790.1TAIR:AT2G13790.1Symbol:ATSERK4EMBL:AY056243EMBL:FJ708691
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004675
GO:GO:0004713GO:GO:0004714GO:GO:0004871GO:GO:0005102GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0008219GO:GO:0009719GO:GO:0009742GO:GO:0009791GO:GO:0009987
GO:GO:0010200GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0018108GO:GO:0019538GO:GO:0033612GO:GO:0038023GO:GO:0060548GO:GO:1900140
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfRefSeq:NP_178999.2
PFAM:PF00069PFAM:PF08263PO:PO:0000013PO:PO:0000014PO:PO:0000293PO:PO:0009001
PO:PO:0009005PO:PO:0009046ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q9SKG5InterPro:SERKSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000A2749
SEG:seg:::::
Description
SERK4Somatic embryogenesis receptor kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKG5]
Coordinates
chr2:+:5741592..5746833
Molecular Weight (calculated)
68639.3 Da
IEP (calculated)
5.010
GRAVY (calculated)
-0.192
Length
620 amino acids
Sequence
(BLAST)
001: MTSSKMEQRS LLCFLYLLLL FNFTLRVAGN AEGDALTQLK NSLSSGDPAN NVLQSWDATL VTPCTWFHVT CNPENKVTRV DLGNAKLSGK LVPELGQLLN
101: LQYLELYSNN ITGEIPEELG DLVELVSLDL YANSISGPIP SSLGKLGKLR FLRLNNNSLS GEIPMTLTSV QLQVLDISNN RLSGDIPVNG SFSLFTPISF
201: ANNSLTDLPE PPPTSTSPTP PPPSGGQMTA AIAGGVAAGA ALLFAVPAIA FAWWLRRKPQ DHFFDVPAEE DPEVHLGQLK RFTLRELLVA TDNFSNKNVL
301: GRGGFGKVYK GRLADGNLVA VKRLKEERTK GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPEGNPAL DWPKRKHIAL
401: GSARGLAYLH DHCDQKIIHR DVKAANILLD EEFEAVVGDF GLAKLMNYND SHVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGVMLLEL ITGQKAFDLA
501: RLANDDDIML LDWVKEVLKE KKLESLVDAE LEGKYVETEV EQLIQMALLC TQSSAMERPK MSEVVRMLEG DGLAERWEEW QKEEMPIHDF NYQAYPHAGT
601: DWLIPYSNSL IENDYPSGPR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.