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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001255.1-P
Bra006366.1-P
Bra010684.1-P
Bra011862.1-P
Bra033615.1-P
Bra040380.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G13790.1 Bra010684.1-P AT4G39400.1 17600708
AT2G13790.1 Bra011862.1-P AT4G39400.1 17600708
AT2G13790.1 Bra033615.1-P AT4G39400.1 17600708
AT2G13790.1 Bra001255.1-P AT5G48380.1 19616764
AT2G13790.1 Bra006366.1-P AT5G48380.1 19616764
AT2G13790.1 Bra040380.1-P AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032125.1-P Field mustard plasma membrane 93.63 84.92
CDY39690 Canola cytosol 100.0 80.23
Bra041056.1-P Field mustard plasma membrane 68.79 64.8
Bra037006.1-P Field mustard mitochondrion 63.04 64.09
AT2G13800.3 Thale cress plasma membrane 77.41 62.73
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 66.53 62.55
AT2G13790.1 Thale cress plasma membrane 79.47 62.42
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 67.15 62.29
Bra034562.1-P Field mustard plasma membrane 71.66 61.66
Bra011439.1-P Field mustard plasma membrane 64.68 60.58
GSMUA_Achr7P17210_001 Banana cytosol 59.96 59.23
Solyc10g047140.1.1 Tomato plasma membrane 73.1 57.89
Bra003911.1-P Field mustard plasma membrane 67.76 57.79
Bra013136.1-P Field mustard plasma membrane 68.17 57.44
Solyc01g104970.2.1 Tomato plasma membrane 72.48 57.31
TraesCS6D01G186900.2 Wheat plasma membrane 70.64 56.95
VIT_12s0055g01160.t01 Wine grape plasma membrane 71.25 56.89
TraesCS6A01G203600.2 Wheat cytosol 70.64 56.49
Os08t0174700-01 Rice plasma membrane 72.07 56.25
KRH58311 Soybean plasma membrane 71.46 56.04
VIT_12s0055g01280.t01 Wine grape plasma membrane 58.93 55.95
GSMUA_Achr2P14850_001 Banana plastid 71.66 55.84
EES07030 Sorghum plasma membrane 71.66 55.75
GSMUA_Achr10P... Banana plasma membrane 71.46 55.59
Zm00001d016928_P010 Maize plasma membrane 71.46 55.59
KXG24562 Sorghum plasma membrane 71.87 55.47
TraesCS7D01G291200.3 Wheat plasma membrane 70.64 55.39
TraesCS7A01G293300.3 Wheat plasma membrane 70.43 55.14
EES12285 Sorghum plasma membrane 70.43 55.14
Zm00001d050868_P004 Maize plasma membrane 70.43 55.06
Zm00001d025580_P001 Maize plasma membrane 70.23 54.98
Os04t0457800-01 Rice plasma membrane 70.84 54.94
TraesCS7B01G182300.1 Wheat plasma membrane 70.02 54.82
TraesCS6B01G223700.3 Wheat plasma membrane 70.64 54.78
HORVU6Hr1G049080.7 Barley plasma membrane 70.64 54.78
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 70.43 54.7
TraesCS2B01G340700.1 Wheat plasma membrane 70.43 54.7
TraesCS2D01G321400.1 Wheat mitochondrion 70.43 54.7
Zm00001d024430_P002 Maize plasma membrane 71.66 54.7
GSMUA_AchrUn_... Banana plasma membrane 70.23 54.29
GSMUA_Achr7P11620_001 Banana plasma membrane 70.43 53.34
Zm00001d049480_P005 Maize plasma membrane 70.64 52.2
Bra016112.1-P Field mustard plasma membrane 64.68 51.89
HORVU7Hr1G068990.2 Barley mitochondrion 70.64 51.04
KRH42193 Soybean plasma membrane 62.42 49.35
KRH58312 Soybean plasma membrane 62.01 49.11
HORVU2Hr1G080020.6 Barley cytosol 70.43 48.45
GSMUA_Achr10P... Banana mitochondrion 71.25 47.86
Bra025145.1-P Field mustard plasma membrane 51.54 46.74
Bra024369.1-P Field mustard plasma membrane 52.77 45.73
Bra028592.1-P Field mustard plasma membrane 55.85 44.52
Bra031479.1-P Field mustard endoplasmic reticulum, plasma membrane 47.02 42.1
Os06t0225300-01 Rice plasma membrane 53.18 42.05
Bra008659.1-P Field mustard plasma membrane 54.41 41.8
Bra024069.1-P Field mustard plasma membrane 51.75 39.62
Bra032133.1-P Field mustard plasma membrane 51.75 39.56
Bra038656.1-P Field mustard cytosol 47.02 39.55
Bra025056.1-P Field mustard plasma membrane 49.28 39.02
Bra006335.1-P Field mustard plasma membrane 52.98 38.0
Bra011200.1-P Field mustard plastid 36.14 32.84
Bra035044.1-P Field mustard plasma membrane, vacuole 23.2 32.19
Bra005319.1-P Field mustard plasma membrane 30.6 30.41
Bra010115.1-P Field mustard plasma membrane 34.29 28.6
Bra035884.1-P Field mustard plasma membrane 34.7 28.07
Bra023017.1-P Field mustard plasma membrane 30.6 27.64
Bra017307.1-P Field mustard plasma membrane 32.65 27.04
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EnsemblPlantsGene:Bra032128EnsemblPlants:Bra032128.1EnsemblPlants:Bra032128.1-P
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfUniProt:M4ETJ6PFAM:PF00069
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF1
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI00025447CESEG:seg:::
Description
AT2G13790 (E=5e-153) ATSERK4, SERK4, BKK1 | SERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4); protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase
Coordinates
chrA04:-:10728568..10732003
Molecular Weight (calculated)
54521.7 Da
IEP (calculated)
5.398
GRAVY (calculated)
-0.172
Length
487 amino acids
Sequence
(BLAST)
001: MIAVDALTAL RLSLSDPKNV LQSWTWNATD VTPCSWFHVT CNNETTVVRV ELFSNNITRG IPEELGVLTE LVSLELYMNN LSGSIPSSLG NLKKLIYLRL
101: NNNALSGELP RSLTDVLSLQ VLFANNNNLR LLPAPPSGEE DPEVHLGQLR RFSLRELLVA TNDFSYKNLL GRGGFGKVYK GRLADGSLVA VKRLKEERTK
201: GVELQFQTEV VMISMAVRRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPRGNAAL DWAKRKHIAL GAAKGLAYLH DHCDQKIIHR DVKAANILLD
301: EQFEAVVGDF GLAKLMNYND SHVTTDVRGT IGHIAPEYLS TGKSSVKTDV FGYGVMLLEL ITGQKALDLA RLATDDDNML LDWVKEVLKE EKLESLVDAE
401: LEGNYVDKEV EELIEMVLLC TQSSSLKRPS MAEVVRMLEG DGLAEKWEEW QKKEMLTTDF NYPQAYINGF VPESISHIDN DYLSGPR
Best Arabidopsis Sequence Match ( AT2G13800.1 )
(BLAST)
001: MEHGSSRGFI WLILFLDFVS RVTGKTQVDA LIALRSSLSS GDHTNNILQS WNATHVTPCS WFHVTCNTEN SVTRLDLGSA NLSGELVPQL AQLPNLQYLE
101: LFNNNITGEI PEELGDLMEL VSLDLFANNI SGPIPSSLGK LGKLRFLRLY NNSLSGEIPR SLTALPLDVL DISNNRLSGD IPVNGSFSQF TSMSFANNKL
201: RPRPASPSPS PSGTSAAIVV GVAAGAALLF ALAWWLRRKL QGHFLDVPAE EDPEVYLGQF KRFSLRELLV ATEKFSKRNV LGKGRFGILY KGRLADDTLV
301: AVKRLNEERT KGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPEGNPA LDWPKRKHIA LGSARGLAYL HDHCDQKIIH
401: LDVKAANILL DEEFEAVVGD FGLAKLMNYN DSHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGVMLLE LITGQKAFDL ARLANDDDIM LLDWVKEVLK
501: EKKLESLVDA ELEGKYVETE VEQLIQMALL CTQSSAMERP KMSEVVRMLE GDGLAERWEE WQKEEMPIHD FNYQAYPHAG TDWLIPYSNS LIENDYPSGP
601: R
Arabidopsis Description
SERK5Somatic embryogenesis receptor kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.