Factsheet for Bra003911.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001297.1-P
Bra003911.1-P
Bra007104.1-P
Bra010684.1-P
Bra011862.1-P
Bra014785.1-P
Bra016112.1-P
Bra029795.1-P
Bra033615.1-P
Bra034089.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G71830.1	Bra003911.1-P	AT1G71830.1	11397085
AT1G71830.1	Bra016112.1-P	AT1G71830.1	11397085
AT1G71830.1	Bra003911.1-P	AT1G71830.1	16621602
AT1G71830.1	Bra016112.1-P	AT1G71830.1	16621602
AT1G71830.1	Bra001297.1-P	AT3G09840.1	15592873
AT1G71830.1	Bra029795.1-P	AT3G09840.1	15592873
AT1G71830.1	Bra034089.1-P	AT3G09840.1	15592873
AT1G71830.1	Bra001297.1-P	AT3G09840.1	16473966
AT1G71830.1	Bra029795.1-P	AT3G09840.1	16473966
AT1G71830.1	Bra034089.1-P	AT3G09840.1	16473966
AT1G71830.1	Bra001297.1-P	AT3G09840.1	16621602
AT1G71830.1	Bra029795.1-P	AT3G09840.1	16621602
AT1G71830.1	Bra034089.1-P	AT3G09840.1	16621602
AT1G71830.1	Bra001297.1-P	AT3G09840.1	17693538
AT1G71830.1	Bra029795.1-P	AT3G09840.1	17693538
AT1G71830.1	Bra034089.1-P	AT3G09840.1	17693538
AT1G71830.1	Bra007104.1-P	AT3G54840.1	16621602
AT1G71830.1	Bra014785.1-P	AT3G54840.1	16621602
AT1G71830.1	Bra010684.1-P	AT4G39400.1	16473966
AT1G71830.1	Bra011862.1-P	AT4G39400.1	16473966
AT1G71830.1	Bra033615.1-P	AT4G39400.1	16473966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36679	Canola	plasma membrane	99.65	91.63
AT1G71830.1	Thale cress	plasma membrane	97.2	88.8
Bra016112.1-P	Field mustard	plasma membrane	89.67	84.35
KRG91762	Soybean	plasma membrane	89.49	81.89
KRH35013	Soybean	plasma membrane	89.32	81.73
VIT_18s0164g00070.t01	Wine grape	plasma membrane	88.97	81.41
Solyc04g072570.2.1	Tomato	extracellular	88.62	80.45
PGSC0003DMT400070819	Potato	plasma membrane	88.79	79.97
KRH70218	Soybean	endoplasmic reticulum	87.39	79.97
Bra011439.1-P	Field mustard	plasma membrane	71.98	79.04
TraesCS6D01G186900.2	Wheat	plasma membrane	82.84	78.31
TraesCS6A01G203600.2	Wheat	cytosol	83.19	78.0
Bra034562.1-P	Field mustard	plasma membrane	77.06	77.74
Os08t0174700-01	Rice	plasma membrane	84.59	77.4
TraesCS7D01G291200.3	Wheat	plasma membrane	84.06	77.29
GSMUA_Achr7P17210_001	Banana	cytosol	66.55	77.08
TraesCS7A01G293300.3	Wheat	plasma membrane	83.89	77.01
TraesCS7B01G182300.1	Wheat	plasma membrane	83.71	76.85
GSMUA_AchrUn_...	Banana	plasma membrane	84.24	76.35
TraesCS6B01G223700.3	Wheat	plasma membrane	83.54	75.96
HORVU6Hr1G049080.7	Barley	plasma membrane	83.54	75.96
GSMUA_Achr2P14850_001	Banana	plastid	83.01	75.84
Os04t0457800-01	Rice	plasma membrane	83.19	75.64
Zm00001d016928_P010	Maize	plasma membrane	82.84	75.56
EES07030	Sorghum	plasma membrane	82.84	75.56
GSMUA_Achr10P...	Banana	plasma membrane	82.66	75.4
TraesCS2B01G340700.1	Wheat	plasma membrane	82.66	75.28
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	82.49	75.12
KXG24562	Sorghum	plasma membrane	83.01	75.12
TraesCS2D01G321400.1	Wheat	mitochondrion	82.31	74.96
Zm00001d050868_P004	Maize	plasma membrane	81.79	74.96
Zm00001d024430_P002	Maize	plasma membrane	83.36	74.61
Bra037006.1-P	Field mustard	mitochondrion	62.52	74.53
EES12285	Sorghum	plasma membrane	80.91	74.28
Zm00001d025580_P001	Maize	plasma membrane	80.91	74.28
GSMUA_Achr7P11620_001	Banana	plasma membrane	83.19	73.87
CDX68299	Canola	plasma membrane	91.59	73.77
HORVU7Hr1G068990.2	Barley	mitochondrion	84.24	71.36
Bra041056.1-P	Field mustard	plasma membrane	62.35	68.86
Zm00001d049480_P005	Maize	plasma membrane	78.81	68.29
Bra032128.1-P	Field mustard	cytosol	57.79	67.76
HORVU2Hr1G080020.6	Barley	cytosol	82.31	66.38
GSMUA_Achr10P...	Banana	mitochondrion	83.71	65.93
Bra032125.1-P	Field mustard	plasma membrane	61.12	64.99
Bra013136.1-P	Field mustard	plasma membrane	62.17	61.42
Bra024369.1-P	Field mustard	plasma membrane	52.89	53.74
Bra025145.1-P	Field mustard	plasma membrane	50.09	53.26
Os06t0225300-01	Rice	plasma membrane	56.74	52.6
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	49.04	51.47
Bra028592.1-P	Field mustard	plasma membrane	53.24	49.75
Bra038656.1-P	Field mustard	cytosol	48.86	48.19
Bra008659.1-P	Field mustard	plasma membrane	53.42	48.11
Bra024069.1-P	Field mustard	plasma membrane	50.61	45.44
Bra032133.1-P	Field mustard	plasma membrane	49.39	44.27
Bra025056.1-P	Field mustard	plasma membrane	46.23	42.93
Bra006335.1-P	Field mustard	plasma membrane	50.61	42.56
Bra011200.1-P	Field mustard	plastid	37.13	39.55
Bra035044.1-P	Field mustard	plasma membrane, vacuole	22.07	35.9
Bra005319.1-P	Field mustard	plasma membrane	28.02	32.65
Bra010115.1-P	Field mustard	plasma membrane	31.52	30.82
Bra035884.1-P	Field mustard	plasma membrane	31.7	30.07
Bra017307.1-P	Field mustard	plasma membrane	30.65	29.76
Bra023017.1-P	Field mustard	plasma membrane	27.15	28.76

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.3.2.1.2	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra003911	EnsemblPlants:Bra003911.1
EnsemblPlants:Bra003911.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M4CI78
PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF494	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:SERK	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002541825	SEG:seg

Description

AT1G71830 (E=4e-221) SERK1, ATSERK1 | SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase

Coordinates

chrA07:-:15704307..15707327

Molecular Weight (calculated)

63159.0 Da

IEP (calculated)

5.475

GRAVY (calculated)

-0.135

Length

571 amino acids

Sequence
(BLAST)

001: METIHVAFIL LSLIFLPKHA SANLEGDALH TLRVTLVDPN NVLQSWDPTL VNPCTWFHVT CNNENSVIRV DLGNAELSGH LVPELGVLKN LQYLELYSNN
101: ITGPIPSNLG NLTNLVSLDL YLNSFTGPIP ESLGKLSKLS FANNLDLCGP VTSHPCPGSP PFSPPPPFIP PPPVSTPSGY GITGAIAGGV AAGAALLFAA
201: PAIAFAWWRR RKPHDIFFDV PAEEDPEVHL GQLKRFSLRE LQVASDGFSN KNILGRGGFG KVYKGRLADG TLVAVKRLKE ERTPGGELQF QTEVEMISMA
301: VHRNLLRLRG FCMTPTERLL VYPYMANGSV ASCLRERPPS QPPLDWPTRK RIALGSARGL SYLHDHCDPK IIHRDVKAAN ILLDEDFEAV VGDFGLAKLM
401: DYKDTHVTTA VRGTIGHIAP EYLSTGKSSE KTDVFGYGIM LLELITGQRA FDLARLANDD DVMLLDWVKG LLKEKKLEML VDPDLQTNYE ERELEQVIQV
501: ALLCTQGSPM ERPKMSEVVR MLEGDGLAER WDEWQKVEIL REDVDLSPNL HSDWIVDSTY NLHAVELSGP R

Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)

001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR

Arabidopsis Description

SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.