Factsheet for Bra008659.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69484	Canola	plasma membrane	98.74	98.74
CDY26481	Canola	plasma membrane	97.32	96.86
AT5G16000.1	Thale cress	plasma membrane	90.38	89.81
VIT_14s0083g00620.t01	Wine grape	plasma membrane	77.44	78.94
KRH45170	Soybean	plasma membrane	77.13	78.49
KRH01456	Soybean	plasma membrane	76.81	78.17
Bra006335.1-P	Field mustard	plasma membrane	82.81	77.32
KRG93765	Soybean	plasma membrane	75.55	76.76
KRH18305	Soybean	plasma membrane	75.08	76.28
Solyc02g089550.2.1	Tomato	plasma membrane	75.08	76.04
Zm00001d018347_P001	Maize	cytosol	9.31	73.75
GSMUA_Achr3P28140_001	Banana	plasma membrane	70.82	73.01
TraesCS6A01G289500.1	Wheat	plasma membrane	70.5	71.63
TraesCS6D01G269400.1	Wheat	plasma membrane	70.66	71.57
TraesCS6B01G319700.1	Wheat	plasma membrane	70.5	71.52
PGSC0003DMT400026062	Potato	plasma membrane	74.76	71.39
Bra025145.1-P	Field mustard	plasma membrane	59.46	70.2
EES05592	Sorghum	plasma membrane	69.09	69.97
EER88222	Sorghum	plasma membrane	69.4	69.95
GSMUA_Achr9P19160_001	Banana	plasma membrane	68.61	69.82
Zm00001d017913_P001	Maize	plasma membrane	68.77	69.43
TraesCS7D01G212800.1	Wheat	plasma membrane	68.3	69.28
TraesCS7A01G211100.1	Wheat	plasma membrane	68.14	69.12
TraesCS7B01G118100.1	Wheat	plasma membrane	67.98	68.96
HORVU7Hr1G043030.2	Barley	plasma membrane	67.67	68.64
Zm00001d037297_P002	Maize	plasma membrane	68.93	66.41
GSMUA_Achr9P14620_001	Banana	plasma membrane	72.56	65.62
GSMUA_Achr1P16110_001	Banana	plasma membrane	69.09	65.08
GSMUA_Achr1P09620_001	Banana	plasma membrane	71.92	65.05
GSMUA_Achr3P06260_001	Banana	plasma membrane	70.35	64.92
HORVU6Hr1G072620.29	Barley	plasma membrane	70.5	64.78
Os06t0274500-01	Rice	extracellular	65.14	64.53
Bra024069.1-P	Field mustard	plasma membrane	61.2	61.01
GSMUA_Achr7P06010_001	Banana	plasma membrane	68.93	60.44
Bra032133.1-P	Field mustard	plasma membrane	60.57	60.28
Zm00001d045728_P003	Maize	plasma membrane	67.82	59.07
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.0	58.27
Os02t0728500-01	Rice	extracellular, plasma membrane	29.5	57.72
Bra032128.1-P	Field mustard	cytosol	41.8	54.41
Bra037006.1-P	Field mustard	mitochondrion	40.69	53.86
Bra003911.1-P	Field mustard	plasma membrane	48.11	53.42
Bra025056.1-P	Field mustard	plasma membrane	50.47	52.03
Bra034562.1-P	Field mustard	plasma membrane	46.37	51.94
Bra011439.1-P	Field mustard	plasma membrane	42.59	51.92
Bra032125.1-P	Field mustard	plasma membrane	43.53	51.4
Bra011200.1-P	Field mustard	plastid	43.22	51.12
Bra016112.1-P	Field mustard	plasma membrane	48.74	50.91
Bra041056.1-P	Field mustard	plasma membrane	40.85	50.1
Bra024369.1-P	Field mustard	plasma membrane	44.32	50.0
Bra028592.1-P	Field mustard	plasma membrane	46.69	48.45
Bra038656.1-P	Field mustard	cytosol	41.01	44.91
Bra013136.1-P	Field mustard	plasma membrane	39.75	43.6
Bra035044.1-P	Field mustard	plasma membrane, vacuole	19.87	35.9
Bra010115.1-P	Field mustard	plasma membrane	31.86	34.59
Bra005319.1-P	Field mustard	plasma membrane	26.34	34.08
Bra035884.1-P	Field mustard	plasma membrane	30.91	32.56
Bra017307.1-P	Field mustard	plasma membrane	29.5	31.8
Bra023017.1-P	Field mustard	plasma membrane	26.34	30.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra008659	EnsemblPlants:Bra008659.1
EnsemblPlants:Bra008659.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	UniProt:M4CWR2	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFAM:PF12799	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002544C32	SEG:seg	:

Description

AT5G16000 (E=3e-292) NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase

Coordinates

chrA10:-:13271385..13273929

Molecular Weight (calculated)

70215.8 Da

IEP (calculated)

7.415

GRAVY (calculated)

-0.107

Length

634 amino acids

Sequence
(BLAST)

001: MMMRRSLVYF LAFSCLLCSV SGLLSSKGVN FEVQALMDIK ASLHDPHGVL DNWDRDAVDP CSWTMVTCSS ENFVIGLGTP SQNLSGTLSP SITNLTNLRI
101: VLLQNNNITG KIPYEIGRLT RLETLDLSDN FFRGEIPFSL GNLPSLQYLR LNNNSLSGVI PLSLSNMTQL ALLDLSYNNL SSPVPRFAAK TFSIVGNPLI
201: CPTGKEPDCN GTTLIPMSMN LNETRAPLYV GRPKNHKMAI AVGSSVGIIS FIFIVVGLFL WWRQRHNQNT TFFDVKDGHH HHEEVSLGNL RRFGFRELQI
301: ATNNFSSKNL LGKGGYGNVY KGTLTDNTVV AVKRLKDGNA LGGEIQFQTE VEMISLAVHR NLLRLYGFCI TQAEKLLVYP YMSNGSVASR MKAKPVLDWS
401: VRKKIAIGAA RGLVYLHEQC DPKIIHRDVK AANILLDDYC EAVVGDFGLA KLLDHQDTHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELVTG
501: LRALEFGKAA NQKGAMLEWV KKLHLEKKLE VLVDKELLKD EKSYDEIELE EMVRVALLCT QYLPGHRPKM SEVVRMLEGD GLAERWEASQ GRSESGSKGS
601: HGRVNELMSS SDRYSDLTDD STLLAQAMEL SGPR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.