Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037297_P002 Maize plasma membrane 92.21 88.15
Zm00001d018347_P001 Maize cytosol 10.97 86.25
TraesCS7D01G212800.1 Wheat plasma membrane 85.53 86.08
TraesCS7A01G211100.1 Wheat plasma membrane 85.37 85.92
TraesCS7B01G118100.1 Wheat plasma membrane 85.21 85.76
HORVU7Hr1G043030.2 Barley plasma membrane 84.74 85.28
EES05592 Sorghum plasma membrane 82.35 82.75
Zm00001d045728_P003 Maize plasma membrane 91.57 79.12
Os06t0274500-01 Rice extracellular 79.33 77.97
VIT_14s0083g00620.t01 Wine grape plasma membrane 73.77 74.6
VIT_01s0010g01000.t01 Wine grape plasma membrane 73.61 74.08
KRH01456 Soybean plasma membrane 72.97 73.68
KRH45170 Soybean plasma membrane 72.66 73.35
KRG93765 Soybean plasma membrane 72.5 73.08
GSMUA_Achr3P28140_001 Banana plasma membrane 71.22 72.85
KRH18305 Soybean plasma membrane 71.86 72.44
KRH75229 Soybean plasma membrane 70.59 71.5
Solyc02g089550.2.1 Tomato plasma membrane 71.07 71.41
KRH71075 Soybean plasma membrane 70.27 71.18
Solyc05g010400.2.1 Tomato plasma membrane 70.27 71.18
PGSC0003DMT400019446 Potato plasma membrane 70.11 71.01
AT5G16000.1 Thale cress plasma membrane 71.22 70.22
PGSC0003DMT400007454 Potato plasma membrane 69.16 70.16
Solyc04g005910.2.1 Tomato plasma membrane 68.68 69.68
Bra008659.1-P Field mustard plasma membrane 69.95 69.4
CDX69484 Canola plasma membrane 69.63 69.09
CDY26481 Canola plasma membrane 69.63 68.76
GSMUA_Achr9P19160_001 Banana plasma membrane 67.41 68.06
Bra025145.1-P Field mustard plasma membrane 58.03 67.97
GSMUA_Achr9P14620_001 Banana plasma membrane 75.04 67.33
PGSC0003DMT400026062 Potato plasma membrane 70.75 67.02
CDX83534 Canola plasma membrane 67.73 66.56
CDY48073 Canola plasma membrane 67.57 66.41
AT3G25560.3 Thale cress plasma membrane 68.04 66.15
GSMUA_Achr1P09620_001 Banana plasma membrane 71.86 64.48
GSMUA_Achr3P06260_001 Banana plasma membrane 70.11 64.19
GSMUA_Achr1P16110_001 Banana plasma membrane 68.68 64.19
EES02381 Sorghum golgi, plasma membrane, vacuole 63.27 62.78
GSMUA_Achr7P06010_001 Banana plasma membrane 71.38 62.1
CDX70667 Canola endoplasmic reticulum, golgi 67.57 59.03
CDX78667 Canola golgi, plasma membrane 67.73 58.92
Bra006335.1-P Field mustard plasma membrane 63.27 58.62
EES06565 Sorghum plasma membrane 54.53 54.7
EES12285 Sorghum plasma membrane 52.94 53.54
EES07030 Sorghum plasma membrane 53.1 53.35
KXG24562 Sorghum plasma membrane 53.1 52.93
OQU91137 Sorghum plasma membrane 39.43 52.1
KXG25244 Sorghum plastid 60.57 51.7
EES04934 Sorghum plasma membrane 47.06 47.51
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 46.42 46.28
EES10085 Sorghum plasma membrane 44.99 45.72
EER95121 Sorghum plasma membrane 31.8 33.73
EES02154 Sorghum golgi, plasma membrane 19.4 33.52
EES17498 Sorghum plasma membrane 31.48 31.63
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8062096UniProt:C5Z8J1
EnsemblPlants:EER88222ProteinID:EER88222ProteinID:EER88222.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
GO:GO:0038023InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_4PFAM:PF00069PFAM:PF08263PFAM:PF12799ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF220InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3010G115300SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A8953CRefSeq:XP_002436855.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr10:+:12319819..12323539
Molecular Weight (calculated)
68941.1 Da
IEP (calculated)
7.726
GRAVY (calculated)
-0.116
Length
629 amino acids
Sequence
(BLAST)
001: MEAAPPSSSP SSLAVLLMLL LIVSSPCSAL LSPKGVNPEV QALMTIKNML EDPRGVLKNW DQNSVDPCSW TTVSCSLENF VTRLEVPGQN LSGLLSPSLG
101: NLTNLETLSM QNNNITGPIP AEIGKLTKLK TLDLSSNHLY GGIPTSVGHL ESLQYLRLNN NTLSGPFPSV SANLSQLVFL DLSYNNLSGP IPGSLARTFN
201: IVGNPLICGT NTEKDCYGTA PMPVSYNLNS SQGALPPAKS KSHKFAIAFG TAVGCISFLF LAAGFLFWWR HRRNRQILFD VDDQHMENVS LGNVKRFQFR
301: ELQSVTENFS SKNILGKGGF GYVYKGQLPD GTLVAVKRLK DGNAAGGEAQ FQTEVEMISL ALHRNLLRLY GFCMTATERL LVYPYMSNGS VASRLKGKPP
401: LDWVTRKRIA LGAGRGLLYL HEQCDPKIIH RDVKAANILL DDYCEAIVGD FGLAKLLDHR DSHVTTAVRG TVGHIAPEYL STGQSSEKTD VFGFGILLLE
501: LITGQTALEF GKAANQKGAM LDWVKKMHQE KKLDVLVDKG LRGGYDRIEL EEMVQVALLC TQYLPGHRPK MSEVVRMLEG DGLAERWEAS QRADSHKFKV
601: PDFTFSRCYS DLTDDSSLLV QAVELSGPR
Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)
001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR
Arabidopsis Description
NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.