Factsheet for GSMUA_Achr1P09620_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19160_001	Banana	plasma membrane	71.47	80.42
VIT_14s0083g00620.t01	Wine grape	plasma membrane	67.9	76.53
VIT_01s0010g01000.t01	Wine grape	plasma membrane	68.19	76.48
GSMUA_Achr3P28140_001	Banana	plasma membrane	66.76	76.1
KRH01456	Soybean	plasma membrane	66.9	75.28
KRH45170	Soybean	plasma membrane	66.33	74.64
KRG93765	Soybean	plasma membrane	65.76	73.88
KRH71075	Soybean	plasma membrane	65.19	73.59
KRH75229	Soybean	plasma membrane	65.19	73.59
KRH18305	Soybean	plasma membrane	65.48	73.56
Solyc02g089550.2.1	Tomato	plasma membrane	65.48	73.32
TraesCS6A01G289500.1	Wheat	plasma membrane	65.19	73.24
TraesCS6D01G269400.1	Wheat	plasma membrane	65.19	73.0
TraesCS6B01G319700.1	Wheat	plasma membrane	64.91	72.8
PGSC0003DMT400007454	Potato	plasma membrane	63.62	71.94
Bra008659.1-P	Field mustard	plasma membrane	65.05	71.92
EES05592	Sorghum	plasma membrane	64.19	71.89
EER88222	Sorghum	plasma membrane	64.48	71.86
Solyc04g005910.2.1	Tomato	plasma membrane	63.48	71.77
Zm00001d017913_P001	Maize	plasma membrane	64.19	71.66
CDX69484	Canola	plasma membrane	64.62	71.45
Zm00001d018347_P001	Maize	cytosol	8.13	71.25
HORVU7Hr1G043030.2	Barley	plasma membrane	63.34	71.04
TraesCS7B01G118100.1	Wheat	plasma membrane	63.34	71.04
Solyc05g010400.2.1	Tomato	plasma membrane	62.91	71.01
PGSC0003DMT400019446	Potato	plasma membrane	62.91	71.01
TraesCS7D01G212800.1	Wheat	plasma membrane	63.2	70.88
TraesCS7A01G211100.1	Wheat	plasma membrane	63.2	70.88
CDY26481	Canola	plasma membrane	64.34	70.8
AT5G16000.1	Thale cress	plasma membrane	64.05	70.38
GSMUA_Achr1P16110_001	Banana	plasma membrane	67.19	69.99
PGSC0003DMT400026062	Potato	plasma membrane	65.48	69.13
GSMUA_Achr7P06010_001	Banana	plasma membrane	69.47	67.36
Zm00001d037297_P002	Maize	plasma membrane	63.2	67.33
GSMUA_Achr9P14620_001	Banana	plasma membrane	66.76	66.76
GSMUA_Achr3P06260_001	Banana	plasma membrane	65.19	66.52
HORVU6Hr1G072620.29	Barley	plasma membrane	65.19	66.23
Os06t0274500-01	Rice	extracellular	59.91	65.62
GSMUA_Achr2P23200_001	Banana	plasma membrane	58.06	64.2
GSMUA_Achr6P08840_001	Banana	plasma membrane	55.35	63.92
Zm00001d045728_P003	Maize	plasma membrane	64.05	61.68
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	55.92	60.78
CDX70667	Canola	endoplasmic reticulum, golgi	61.34	59.72
CDX78667	Canola	golgi, plasma membrane	61.34	59.47
Bra006335.1-P	Field mustard	plasma membrane	56.78	58.62
GSMUA_Achr3P04810_001	Banana	plasma membrane	53.64	58.2
GSMUA_Achr7P17210_001	Banana	cytosol	39.8	56.59
Os02t0728500-01	Rice	extracellular, plasma membrane	25.96	56.17
GSMUA_Achr6P00440_001	Banana	plasma membrane	45.79	53.5
GSMUA_AchrUn_...	Banana	plasma membrane	47.22	52.54
GSMUA_Achr2P14850_001	Banana	plastid	46.36	52.0
GSMUA_Achr10P...	Banana	plasma membrane	46.22	51.76
GSMUA_Achr7P11620_001	Banana	plasma membrane	46.51	50.7
GSMUA_Achr8P23480_001	Banana	plasma membrane	41.8	48.59
GSMUA_Achr10P...	Banana	mitochondrion	47.22	45.66
GSMUA_Achr2P22230_001	Banana	plasma membrane	39.66	38.4
GSMUA_Achr4P22330_001	Banana	plastid	26.25	33.09
GSMUA_Achr10P...	Banana	golgi, vacuole	16.55	33.05
GSMUA_Achr3P04890_001	Banana	plasma membrane	27.25	32.21
GSMUA_Achr4P02060_001	Banana	cytosol	22.25	31.45
GSMUA_Achr5P15040_001	Banana	plasma membrane	25.39	29.04
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	16.69	27.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G09620_001	EnsemblPlants:GSMUA_Achr1P09620_001	EnsemblPlants:GSMUA_Achr1T09620_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0RYH1	PFAM:PF00069
PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF217	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002957F3E	SEG:seg	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:GMGC_GENE;Acc:GSMUA_Achr1G09620_001]

Coordinates

chr1:-:7337540..7342576

Molecular Weight (calculated)

78389.4 Da

IEP (calculated)

7.537

GRAVY (calculated)

-0.056

Length

701 amino acids

Sequence
(BLAST)

001: MQGKMGKDLV FWMMFFWSWA AATAVLSPKG VNYEVQALMG IKASLVDPHS VLENWDKDSV DPCSWTMITC SSENLVVGLG TPGQDLSGTL SPSIGNLTNL
101: EIVLLQNNNI SGPVPPEIGK LSKLHTLDLS NNKFSGRIPA SLSNLKGLQY LRLNNNSLSG SFPLPLIDIT PLIFMDLSYN NLSGPIPKSP PKAFNIVGNP
201: LICPTDLEHQ CYGMMPMPST FNINDTQGTS CDENFHLKVL QLLNLILVIF YQRPICVTIV FYLSVILEII FLGFTLLHSR MYSIHRDEEC LQDGFILLNK
301: RQTNSLTSAP MSRRPKRHKL ALALASSLGS ICLLGLVVGL FIWCSRRHNQ QIFFDVNDQH KEEVCLGNLR RFQFRELQVA TNNFSSKNLL GKGGFGNVYK
401: GQLQDGTLVA VKRLKDGNVA GGEIQFKTEV EMISLALHRH LLRLCGFCMT ATERLLVYPY MSNGSVASRL REIPALDWST RKRIALGAAR GLLYLHEQCD
501: PKIIHRDVKA ANILLDDYCE AVVGDFGLAK LLDHRDTHVT TAVRGTVGHI APEYLSTGQS SDKTDVFGFG ILLLELITGL RALEYGKAAK QKGAMLDWVR
601: KMHQEKKLDV LVDKDLKNYD RIELEEMVQV ALLCTQYVPG HRPKMSEVVR MLEGDGLAER WEASQRTEVH KFRVPEFSSE RYSDLTDDSL LVEAMELSGP
701: R

Best Arabidopsis Sequence Match ( AT1G60800.2 )
(BLAST)

001: MVSCTDGYVS SLDLPSQSLS GTLSPRIGNL TYLQSVVLQN NAITGPIPET IGRLEKLQSL DLSNNSFTGE IPASLGELKN LNYLRLNNNS LIGTCPESLS
101: KIEGLTLVDI SYNNLSGSLP KVSARTFKVI GNALICGPKA VSNCSAVPEP LTLPQDGPDE SGTRTNGHHV ALAFAASFSA AFFVFFTSGM FLWWRYRRNK
201: QIFFDVNEQY DPEVSLGHLK RYTFKELRSA TNHFNSKNIL GRGGYGIVYK GHLNDGTLVA VKRLKDCNIA GGEVQFQTEV ETISLALHRN LLRLRGFCSS
301: NQERILVYPY MPNGSVASRL KDNIRGEPAL DWSRRKKIAV GTARGLVYLH EQCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLLDHRD SHVTTAVRGT
401: VGHIAPEYLS TGQSSEKTDV FGFGILLLEL ITGQKALDFG RSAHQKGVML DWVKKLHQEG KLKQLIDKDL NDKFDRVELE EIVQVALLCT QFNPSHRPKM
501: SEVMKMLEGD GLAERWEATQ NGTGEHQPPP LPPGMVSSSP RVRYYSDYIQ ESSLVVEAIE LSGPR

Arabidopsis Description

NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.