Factsheet for GSMUA_Achr8P23480_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0646g00030.t01	Wine grape	cytosol	52.9	91.4
VIT_00s0634g00030.t01	Wine grape	cytosol	34.83	89.36
VIT_00s0641g00010.t01	Wine grape	cytosol	51.24	85.12
OQU91137	Sorghum	plasma membrane	65.84	83.4
Os02t0283800-01	Rice	plasma membrane	82.92	82.37
TraesCS3B01G334400.2	Wheat	plasma membrane	81.26	81.13
TraesCS3D01G299800.1	Wheat	plasma membrane	81.09	80.83
Zm00001d015971_P004	Maize	plasma membrane	80.1	78.16
EES04934	Sorghum	plasma membrane	79.77	77.21
KRH59316	Soybean	plasma membrane	77.45	76.56
KRH43169	Soybean	plasma membrane	77.28	76.39
Solyc11g008960.1.1	Tomato	plasma membrane	75.62	75.5
PGSC0003DMT400041690	Potato	plasma membrane	74.96	74.83
PGSC0003DMT400056093	Potato	plasma membrane	74.3	74.17
Solyc03g078520.2.1	Tomato	plasma membrane	74.46	73.97
CDX85768	Canola	plasma membrane	74.13	73.16
Bra028592.1-P	Field mustard	plasma membrane	74.13	73.16
AT5G10290.1	Thale cress	plasma membrane	73.96	72.76
CDY40089	Canola	plasma membrane	73.63	72.67
Zm00001d033652_P002	Maize	plasma membrane	81.09	71.7
Bra024369.1-P	Field mustard	plasma membrane	66.33	71.17
KRG97568	Soybean	plasma membrane	71.48	71.12
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	24.38	70.67
TraesCS3A01G302200.1	Wheat	plastid	75.95	70.46
CDY08807	Canola	plasma membrane	70.81	70.23
CDY55159	Canola	extracellular, plasma membrane, vacuole	70.65	70.07
KRH31305	Soybean	plasma membrane	72.31	68.88
HORVU3Hr1G073960.5	Barley	plastid	81.43	67.35
AT5G65240.2	Thale cress	plasma membrane	70.48	66.41
GSMUA_Achr7P17210_001	Banana	cytosol	46.27	56.59
GSMUA_Achr2P22230_001	Banana	plasma membrane	67.0	55.8
GSMUA_Achr2P14850_001	Banana	plastid	55.06	53.12
GSMUA_AchrUn_...	Banana	plasma membrane	55.22	52.86
GSMUA_Achr10P...	Banana	plasma membrane	54.23	52.24
GSMUA_Achr7P11620_001	Banana	plasma membrane	55.39	51.94
GSMUA_Achr6P08840_001	Banana	plasma membrane	48.76	48.43
GSMUA_Achr2P23200_001	Banana	plasma membrane	50.41	47.95
GSMUA_Achr3P28140_001	Banana	plasma membrane	48.09	47.15
GSMUA_Achr10P...	Banana	mitochondrion	55.89	46.48
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	46.43	43.41
GSMUA_Achr9P19160_001	Banana	plasma membrane	44.44	43.02
GSMUA_Achr3P04810_001	Banana	plasma membrane	45.61	42.57
GSMUA_Achr1P16110_001	Banana	plasma membrane	47.26	42.35
GSMUA_Achr3P06260_001	Banana	plasma membrane	48.09	42.21
GSMUA_Achr9P14620_001	Banana	plasma membrane	48.92	42.08
GSMUA_Achr6P00440_001	Banana	plasma membrane	41.79	42.0
GSMUA_Achr1P09620_001	Banana	plasma membrane	48.59	41.8
GSMUA_Achr7P06010_001	Banana	plasma membrane	49.59	41.36
GSMUA_Achr4P22330_001	Banana	plastid	32.34	35.07
GSMUA_Achr10P...	Banana	golgi, vacuole	19.9	34.19
GSMUA_Achr3P04890_001	Banana	plasma membrane	33.17	33.73
GSMUA_Achr4P02060_001	Banana	cytosol	26.7	32.46
GSMUA_Achr5P15040_001	Banana	plasma membrane	32.84	32.3
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	19.9	28.1

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G23480_001	EnsemblPlants:GSMUA_Achr8P23480_001	EnsemblPlants:GSMUA_Achr8T23480_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0TT01	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294F78C	SEG:seg	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:GMGC_GENE;Acc:GSMUA_Achr8G23480_001]

Coordinates

chr8:+:27932133..27938669

Molecular Weight (calculated)

67395.0 Da

IEP (calculated)

5.350

GRAVY (calculated)

-0.196

Length

603 amino acids

Sequence
(BLAST)

001: MKVVYLLCVL ISLQSRVESD RQGDALYDMK IKLNATSNQL IDWNQNQVNP CTWNSVICDS NNNVVQVTLS SMGFNGILSP RIGELQYLTV LSLPGNNITG
101: GIPEQFGNLS SLTNLDLEIN RLSGEIPASL GKLAKLQILI LSQNNLTGKI PDSLTNLTAL NDIRLAFNGL SGQIPDELFQ VARYNFTGND LNCGTNQQHL
201: CASSVSVQGK SPNSKIGIVL GIVGGVILLL VIGVVFLICK SRRKGYRREE FVDVAGEDDR RIAFGQLKRF AYRELQIATD GFSEKNVLGQ GGFGKVYKGV
301: LPDSTKIAVK RLTDYESPGG EAAFLREVEM ISVAVHRNLL RLIGFCTTPT ERLLVYPFMQ NLSVAYRLRD FKPGEPVLNW PTRKRVALGT ARGLEYLHEH
401: CSPKIIHRDV KAANVLLDED FEAVVGDFGL AKLVDVRKTS VTTQVRGTMG HIAPEYLSTG KSSERTDVFG YGIMLLELVT GQRAIDFSRL EEEDDVLLLD
501: HVKKLQKEKR LGDIVDRNLN NEYDGQEVEM MIQVALLCTQ ASPEDRPTMS EVVRMLEGEG LAERWEEWQQ VEVRQEYERL QRRFDWGEDS LYNQDAIELS
601: GAR

Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.