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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041690 Potato plasma membrane 98.84 98.84
VIT_00s0646g00030.t01 Wine grape cytosol 54.14 93.7
VIT_00s0634g00030.t01 Wine grape cytosol 34.44 88.51
VIT_00s0641g00010.t01 Wine grape cytosol 51.99 86.5
Solyc03g078520.2.1 Tomato plasma membrane 85.43 85.01
KRH59316 Soybean plasma membrane 81.29 80.49
KRH43169 Soybean plasma membrane 81.13 80.33
OQU91137 Sorghum plasma membrane 61.42 77.94
Bra028592.1-P Field mustard plasma membrane 77.65 76.76
CDX85768 Canola plasma membrane 77.65 76.76
CDY40089 Canola plasma membrane 77.32 76.43
GSMUA_Achr8P23480_001 Banana plasma membrane 75.5 75.62
AT5G10290.1 Thale cress plasma membrane 76.66 75.53
TraesCS3D01G299800.1 Wheat plasma membrane 74.83 74.71
TraesCS3B01G334400.2 Wheat plasma membrane 74.67 74.67
KRG97568 Soybean plasma membrane 74.83 74.59
Bra024369.1-P Field mustard plasma membrane 69.37 74.56
CDY55159 Canola extracellular, plasma membrane, vacuole 74.34 73.85
CDY08807 Canola plasma membrane 74.34 73.85
KRH31305 Soybean plasma membrane 75.99 72.51
Os02t0283800-01 Rice plasma membrane 72.85 72.49
Zm00001d015971_P004 Maize plasma membrane 72.52 70.87
AT5G65240.2 Thale cress plasma membrane 74.01 69.84
VIT_00s0848g00010.t01 Wine grape plasma membrane, plastid 24.01 69.71
EES04934 Sorghum plasma membrane 71.52 69.34
TraesCS3A01G302200.1 Wheat plastid 71.03 66.0
Zm00001d033652_P002 Maize plasma membrane 74.01 65.54
HORVU3Hr1G073960.5 Barley plastid 74.83 62.0
Solyc05g056370.2.1 Tomato vacuole 57.28 56.17
GSMUA_Achr2P22230_001 Banana plasma membrane 63.91 53.31
Solyc04g072570.2.1 Tomato extracellular 55.3 53.1
Solyc10g047140.1.1 Tomato plasma membrane 53.15 52.2
Solyc01g104970.2.1 Tomato plasma membrane 52.65 51.62
Solyc02g072310.2.1 Tomato plasma membrane 37.42 47.98
Solyc02g089550.2.1 Tomato plasma membrane 49.34 47.6
Solyc05g010400.2.1 Tomato plasma membrane 48.68 47.34
Solyc04g039730.2.1 Tomato plasma membrane 48.34 46.87
Solyc04g005910.2.1 Tomato plasma membrane 47.85 46.61
Solyc07g006110.2.1 Tomato plasma membrane 46.85 44.85
Solyc05g005140.2.1 Tomato plasma membrane 44.7 44.78
Solyc07g062040.2.1 Tomato plastid 19.87 38.22
Solyc03g113450.2.1 Tomato plasma membrane 34.11 34.28
Solyc08g074760.2.1 Tomato plasma membrane 32.95 33.79
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
UniProt:K4D5F6InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069
PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF33InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMEnsemblPlantsGene:Solyc11g008960.1EnsemblPlants:Solyc11g008960.1.1TMHMM:TMhelixUniParc:UPI0002769375
SEG:seg:::::
Description
No Description!
Coordinates
chr11:-:3112545..3117930
Molecular Weight (calculated)
67622.3 Da
IEP (calculated)
6.167
GRAVY (calculated)
-0.222
Length
604 amino acids
Sequence
(BLAST)
001: MELFLAILIL ACLYSFVSPD QQGDALFALK SSLNASNDQL SDWNQNQVNP CTWSKITCDD NSNVLMVSLS NMGFTGTLTP RLGVLVHLNT LSLQGNGITG
101: KIPEALGNLT SLTMLDLEKN RLSGEIPASL GNLKKLQFLF LSQNNLSGTI PDSLSGLPNL INLQLALNDL TGKVPDSLFQ VPKYNFSENH LNCGLNFSHR
201: CVSDSEGSPS KSKTGLVIGI VGGFLGIILL GGLMLFFWRG RNKGYKREIY VDVPGEVDRR IPFGQLRRFA WRELQLATDN FSEKNVLGQG GFGKVYKGVL
301: SDSTKVAVKR LTDYESPGGD AAFQREVEMI SVAVHRNLLR LIGFCTTPTE RLLVYPYMQN LSVAYRLREL KPGESVLAWP TRKRVALGTA RGLEYLHEHC
401: NPKIIHRDVK AANVLLDEDF EAVVGDFGLA KLVDVRKTNV TTQVRGTMGH IAPEYLSTGK SSEKTDVFGY GIMLLEIVTG QRAIDFSRLE EEDDVLLLDH
501: VKKLQREKRL DAIVDRNLHK NYNMDEVEMM IQVALLCTQG SPEDRPAMSE VVRMLEGEGL AERWEEWQHV EVTRRQEYER LQRRFDWGED SIYNQDAVEL
601: SGGR
Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)
001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.