Factsheet for Solyc10g047140.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g051510.1.1
Solyc06g082920.2.1
Solyc07g006480.2.1
Solyc12g096710.1.1
Solyc12g096720.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G13790.1	Solyc04g051510.1.1	AT4G39400.1	17600708
AT2G13790.1	Solyc06g082920.2.1	AT5G48380.1	19616764
AT2G13790.1	Solyc07g006480.2.1	AT5G48380.1	19616764
AT2G13790.1	Solyc12g096710.1.1	AT5G48380.1	19616764
AT2G13790.1	Solyc12g096720.1.1	AT5G48380.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	83.41	97.71
Solyc01g104970.2.1	Tomato	plasma membrane	90.08	89.94
KRH10503	Soybean	cytosol, plastid	66.02	86.75
Bra037006.1-P	Field mustard	mitochondrion	66.02	84.76
Bra034562.1-P	Field mustard	plasma membrane	77.56	84.28
CDY45042	Canola	plasma membrane	83.74	84.15
CDX75351	Canola	plasma membrane	84.06	83.93
CDX68975	Canola	plasma membrane	83.9	83.9
Bra011439.1-P	Field mustard	plasma membrane	70.89	83.85
KRH43924	Soybean	plasma membrane	83.58	83.44
CDY46116	Canola	plasma membrane	81.79	83.42
VIT_12s0055g01160.t01	Wine grape	plasma membrane	82.6	83.28
CDX72403	Canola	plasma membrane	81.46	83.08
VIT_12s0055g01280.t01	Wine grape	plasma membrane	67.15	80.51
GSMUA_Achr7P17210_001	Banana	cytosol	63.9	79.72
Solyc04g072570.2.1	Tomato	extracellular	81.3	79.49
TraesCS6D01G186900.2	Wheat	plasma membrane	77.89	79.3
Os08t0174700-01	Rice	plasma membrane	80.16	79.01
TraesCS6A01G203600.2	Wheat	cytosol	78.21	78.98
GSMUA_Achr10P...	Banana	plasma membrane	80.16	78.75
GSMUA_Achr2P14850_001	Banana	plastid	79.84	78.56
AT4G33430.2	Thale cress	plasma membrane	84.55	78.55
CDY28301	Canola	plasma membrane	50.41	78.09
TraesCS7A01G293300.3	Wheat	plasma membrane	78.86	77.97
TraesCS7D01G291200.3	Wheat	plasma membrane	78.7	77.94
AT2G13790.1	Thale cress	plasma membrane	78.37	77.74
KXG24562	Sorghum	plasma membrane	79.67	77.65
GSMUA_AchrUn_...	Banana	plasma membrane	79.51	77.62
HORVU6Hr1G049080.7	Barley	plasma membrane	79.19	77.55
TraesCS6B01G223700.3	Wheat	plasma membrane	79.02	77.39
Os04t0457800-01	Rice	plasma membrane	79.02	77.39
TraesCS7B01G182300.1	Wheat	plasma membrane	78.21	77.33
EES07030	Sorghum	plasma membrane	78.7	77.32
Zm00001d016928_P010	Maize	plasma membrane	78.54	77.16
Zm00001d024430_P002	Maize	plasma membrane	79.67	76.8
Zm00001d050868_P004	Maize	plasma membrane	77.56	76.56
EES12285	Sorghum	plasma membrane	77.4	76.53
TraesCS2B01G340700.1	Wheat	plasma membrane	77.72	76.24
Zm00001d025580_P001	Maize	plasma membrane	77.07	76.21
GSMUA_Achr7P11620_001	Banana	plasma membrane	79.67	76.21
TraesCS2D01G321400.1	Wheat	mitochondrion	77.4	75.92
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	77.4	75.92
CDX89615	Canola	plasma membrane	74.15	74.75
CDX93126	Canola	plasma membrane	74.15	74.75
Bra041056.1-P	Field mustard	plasma membrane	62.6	74.47
CDY48450	Canola	plasma membrane	73.66	74.02
AT2G13800.3	Thale cress	plasma membrane	72.2	73.88
Bra032128.1-P	Field mustard	cytosol	57.89	73.1
HORVU7Hr1G068990.2	Barley	mitochondrion	79.02	72.11
Zm00001d049480_P005	Maize	plasma membrane	75.28	70.26
Bra032125.1-P	Field mustard	plasma membrane	61.3	70.2
CDX71165	Canola	plasma membrane	70.41	70.06
GSMUA_Achr10P...	Banana	mitochondrion	80.33	68.14
HORVU2Hr1G080020.6	Barley	cytosol	77.89	67.66
CDY39690	Canola	cytosol	66.67	67.55
Bra013136.1-P	Field mustard	plasma membrane	59.67	63.49
Os06t0225300-01	Rice	plasma membrane	58.37	58.28
Solyc11g008960.1.1	Tomato	plasma membrane	52.2	53.15
Solyc03g078520.2.1	Tomato	plasma membrane	51.71	52.39
Solyc04g039730.2.1	Tomato	plasma membrane	52.2	51.52
Solyc04g005910.2.1	Tomato	plasma membrane	51.38	50.97
Solyc05g010400.2.1	Tomato	plasma membrane	51.38	50.89
Solyc02g089550.2.1	Tomato	plasma membrane	51.71	50.8
Solyc05g005140.2.1	Tomato	plasma membrane	48.94	49.92
Solyc02g072310.2.1	Tomato	plasma membrane	37.89	49.47
Solyc05g056370.2.1	Tomato	vacuole	48.62	48.54
Solyc07g006110.2.1	Tomato	plasma membrane	47.8	46.59
Solyc07g062040.2.1	Tomato	plastid	19.19	37.58
Solyc08g074760.2.1	Tomato	plasma membrane	32.36	33.79
Solyc03g113450.2.1	Tomato	plasma membrane	32.68	33.44

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.3.2.1.2	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ProteinID:AGG23556.1	UniProt:G0XZA5
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
EMBL:HQ438098	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27001	PANTHER:PTHR27001:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
InterPro:SERK	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc10g047140.1	EnsemblPlants:Solyc10g047140.1.1	TMHMM:TMhelix	UniParc:UPI00021CD72F	SEG:seg	:

Description

Somatic embryogenesis receptor kinase 3A [Source:UniProtKB/TrEMBL;Acc:G0XZA5]

Coordinates

chr10:-:39896530..39907402

Molecular Weight (calculated)

68272.6 Da

IEP (calculated)

5.292

GRAVY (calculated)

-0.236

Length

615 amino acids

Sequence
(BLAST)

001: MDQSVLAIWV FLCLIGLLFN LSPVAGNAEG DALNALKTNL ADPNSVLQSW DATLVNPCTW FHVTCNNENS VTRVDLGNAN LSGQLVPQLG QLQKLQYLEL
101: YSNNISGRIP NELGNLTELV SLDLYLNNLN GPIPPSLGRL QKLRFLRLNN NSLNEGIPMS LTTIVALQVL DLSNNHLTGL VPVNGSFSLF TPISFANNQL
201: EVPPVSPPPP LPPTPSSSSS VGNSATGAIA GGVAAGAALL FAAPAIFLAW WRRRKPQDHF FDVPAEEDPE VHLGQLKRFS LRELQVASDN FSNRNILGRG
301: GFGKVYKGRL ADGSLVAVKR LKEERTQGGE LQFQTEVEMI SMAVHRNLLR LRGFCMTPTE RVLVYPYMEN GSVASRLRER PESEPPLDWP KRKRIALGSA
401: RGLAYLHDHC DPKIIHRDVK AANILLDEEF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK SSEKTDVFGY GVMLLELITG QRAFDLARLA
501: NDDDVMLLDW VKGLLKDKKY ETLVDADLQG NYNEEEVEQL IQVALLCTQS TPTERPKMSE VVRMLEGDGL AERWEEWQKE EMFRQDYNHV HHPHTDWIIA
601: DSTSNIRPDE LSGPR

Best Arabidopsis Sequence Match ( AT4G33430.1 )
(BLAST)

001: MERRLMIPCF FWLILVLDLV LRVSGNAEGD ALSALKNSLA DPNKVLQSWD ATLVTPCTWF HVTCNSDNSV TRVDLGNANL SGQLVMQLGQ LPNLQYLELY
101: SNNITGTIPE QLGNLTELVS LDLYLNNLSG PIPSTLGRLK KLRFLRLNNN SLSGEIPRSL TAVLTLQVLD LSNNPLTGDI PVNGSFSLFT PISFANTKLT
201: PLPASPPPPI SPTPPSPAGS NRITGAIAGG VAAGAALLFA VPAIALAWWR RKKPQDHFFD VPAEEDPEVH LGQLKRFSLR ELQVASDNFS NKNILGRGGF
301: GKVYKGRLAD GTLVAVKRLK EERTQGGELQ FQTEVEMISM AVHRNLLRLR GFCMTPTERL LVYPYMANGS VASCLRERPE SQPPLDWPKR QRIALGSARG
401: LAYLHDHCDP KIIHRDVKAA NILLDEEFEA VVGDFGLAKL MDYKDTHVTT AVRGTIGHIA PEYLSTGKSS EKTDVFGYGV MLLELITGQR AFDLARLAND
501: DDVMLLDWVK GLLKEKKLEA LVDVDLQGNY KDEEVEQLIQ VALLCTQSSP MERPKMSEVV RMLEGDGLAE RWEEWQKEEM FRQDFNYPTH HPAVSGWIIG
601: DSTSQIENEY PSGPR

Arabidopsis Description

BAK1BRI1-associated receptor kinase [Source:UniProtKB/TrEMBL;Acc:F4JIX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.