Factsheet for GSMUA_Achr7P17210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
plasma membrane 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P03160_001
GSMUA_Achr1P05250_001
GSMUA_Achr2P05730_001
GSMUA_Achr2P14850_001
GSMUA_Achr4P08920_001
GSMUA_Achr4P26800_001
GSMUA_Achr4P29310_001
GSMUA_Achr5P10670_001
GSMUA_Achr5P15500_001
GSMUA_Achr6P06130_001
GSMUA_Achr6P28640_001
GSMUA_Achr6P35950_001
GSMUA_Achr7P11620_001
GSMUA_Achr7P17210_001
GSMUA_Achr9P08150_001
GSMUA_Achr9P23550_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34210.1	GSMUA_Achr2P05730_001	AT5G48380.1	19616764
AT1G34210.1	GSMUA_Achr6P28640_001	AT5G48380.1	19616764
AT1G34210.1	GSMUA_Achr9P08150_001	AT5G48380.1	19616764
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr2P14850_001	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr7P11620_001	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr7P17210_001	AT1G71830.1	11397085
AT1G71830.1	GSMUA_AchrUn_...	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr2P14850_001	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr7P11620_001	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr7P17210_001	AT1G71830.1	16621602
AT1G71830.1	GSMUA_AchrUn_...	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr10P...	AT2G33500.1	16473966
AT1G71830.1	GSMUA_Achr11P...	AT2G33500.1	16473966
AT1G71830.1	GSMUA_Achr6P06130_001	AT2G33500.1	16473966
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	15592873
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	15592873
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	15592873
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	16473966
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	16473966
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	16473966
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	16621602
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	16621602
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	16621602
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	17693538
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	17693538
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	17693538
AT1G71830.1	GSMUA_Achr1P03160_001	AT3G54840.1	16621602
AT1G71830.1	GSMUA_Achr4P29310_001	AT3G54840.1	16621602
AT1G71830.1	GSMUA_Achr5P10670_001	AT3G54840.1	16621602
AT1G71830.1	GSMUA_Achr1P05250_001	AT4G39400.1	16473966
AT1G71830.1	GSMUA_Achr4P08920_001	AT4G39400.1	16473966
AT1G71830.1	GSMUA_Achr6P35950_001	AT4G39400.1	16473966
AT1G71830.1	GSMUA_AchrUn_...	AT4G39400.1	16473966
AT2G13790.1	GSMUA_Achr1P05250_001	AT4G39400.1	17600708
AT2G13790.1	GSMUA_Achr4P08920_001	AT4G39400.1	17600708
AT2G13790.1	GSMUA_Achr6P35950_001	AT4G39400.1	17600708
AT2G13790.1	GSMUA_AchrUn_...	AT4G39400.1	17600708
AT2G13790.1	GSMUA_Achr2P05730_001	AT5G48380.1	19616764
AT2G13790.1	GSMUA_Achr6P28640_001	AT5G48380.1	19616764
AT2G13790.1	GSMUA_Achr9P08150_001	AT5G48380.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10503	Soybean	cytosol, plastid	78.3	82.48
Bra037006.1-P	Field mustard	mitochondrion	78.3	80.58
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	79.11	75.29
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	79.11	74.29
Os08t0174700-01	Rice	plasma membrane	90.47	71.47
TraesCS6D01G186900.2	Wheat	plasma membrane	87.42	71.36
TraesCS6A01G203600.2	Wheat	cytosol	87.42	70.77
TraesCS7A01G293300.3	Wheat	plasma membrane	88.84	70.42
GSMUA_Achr2P14850_001	Banana	plastid	89.25	70.4
VIT_18s0164g00070.t01	Wine grape	plasma membrane	89.05	70.35
TraesCS7D01G291200.3	Wheat	plasma membrane	88.44	70.21
VIT_07s0031g01410.t01	Wine grape	plasma membrane	88.84	70.19
KRG91762	Soybean	plasma membrane	88.64	70.03
TraesCS7B01G182300.1	Wheat	plasma membrane	88.03	69.77
KRH35013	Soybean	plasma membrane	88.24	69.71
GSMUA_Achr10P...	Banana	plasma membrane	88.03	69.33
EES07030	Sorghum	plasma membrane	87.63	69.01
KXG24562	Sorghum	plasma membrane	88.24	68.94
Solyc04g072570.2.1	Tomato	extracellular	87.83	68.84
Os04t0457800-01	Rice	plasma membrane	87.63	68.79
Zm00001d016928_P010	Maize	plasma membrane	87.22	68.69
TraesCS6B01G223700.3	Wheat	plasma membrane	87.42	68.63
HORVU6Hr1G049080.7	Barley	plasma membrane	87.42	68.63
KRH70218	Soybean	endoplasmic reticulum	86.61	68.43
GSMUA_AchrUn_...	Banana	plasma membrane	87.22	68.25
TraesCS2D01G321400.1	Wheat	mitochondrion	86.61	68.1
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	86.61	68.1
TraesCS2B01G340700.1	Wheat	plasma membrane	86.41	67.94
Zm00001d024430_P002	Maize	plasma membrane	87.83	67.87
GSMUA_Achr7P11620_001	Banana	plasma membrane	88.44	67.81
Zm00001d050868_P004	Maize	plasma membrane	85.6	67.74
Bra016112.1-P	Field mustard	plasma membrane	83.37	67.71
Zm00001d025580_P001	Maize	plasma membrane	85.19	67.52
EES12285	Sorghum	plasma membrane	84.79	67.2
AT1G34210.1	Thale cress	plasma membrane	85.6	67.2
CDY36679	Canola	plasma membrane	84.38	66.99
Bra011439.1-P	Field mustard	plasma membrane	70.59	66.92
AT1G71830.1	Thale cress	plasma membrane	84.79	66.88
Bra003911.1-P	Field mustard	plasma membrane	77.08	66.55
CDX96350	Canola	plasma membrane	84.18	66.4
CDX72833	Canola	plasma membrane	83.98	66.24
PGSC0003DMT400070819	Potato	plasma membrane	84.18	65.46
HORVU7Hr1G068990.2	Barley	mitochondrion	88.64	64.84
Zm00001d049480_P005	Maize	plasma membrane	86.0	64.34
VIT_12s0055g01160.t01	Wine grape	plasma membrane	79.11	63.93
Solyc10g047140.1.1	Tomato	plasma membrane	79.72	63.9
Solyc01g104970.2.1	Tomato	plasma membrane	79.72	63.8
KRH43924	Soybean	plasma membrane	79.51	63.64
Bra041056.1-P	Field mustard	plasma membrane	66.13	63.06
CDY46116	Canola	plasma membrane	76.67	62.69
CDX72403	Canola	plasma membrane	76.67	62.69
CDX75351	Canola	plasma membrane	78.3	62.66
CDX68975	Canola	plasma membrane	78.09	62.6
CDY45042	Canola	plasma membrane	77.48	62.42
GSMUA_Achr10P...	Banana	mitochondrion	89.86	61.1
Bra034562.1-P	Field mustard	plasma membrane	69.98	60.95
HORVU2Hr1G080020.6	Barley	cytosol	87.02	60.59
Bra032128.1-P	Field mustard	cytosol	59.23	59.96
AT4G33430.2	Thale cress	plasma membrane	79.31	59.06
AT2G13790.1	Thale cress	plasma membrane	74.04	58.87
KRH58311	Soybean	plasma membrane	74.04	58.78
VIT_12s0055g01280.t01	Wine grape	plasma membrane	60.65	58.28
CDX93126	Canola	plasma membrane	70.99	57.38
CDX89615	Canola	plasma membrane	70.79	57.21
AT2G13800.3	Thale cress	plasma membrane	68.97	56.57
CDX68299	Canola	plasma membrane	81.34	56.56
CDY48450	Canola	plasma membrane	69.37	55.88
Bra032125.1-P	Field mustard	plasma membrane	60.85	55.87
VIT_12s0055g01150.t01	Wine grape	plasma membrane	68.36	55.43
CDX71165	Canola	plasma membrane	69.37	55.34
Bra013136.1-P	Field mustard	plasma membrane	64.5	55.02
CDY39690	Canola	cytosol	65.31	53.05
KRH42193	Soybean	plasma membrane	65.92	52.76
KRH58312	Soybean	plasma membrane	65.11	52.2
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	30.63	50.84
CDY28301	Canola	plasma membrane	39.15	48.61
Os06t0225300-01	Rice	plasma membrane	59.84	47.89
GSMUA_Achr8P23480_001	Banana	plasma membrane	56.59	46.27
GSMUA_Achr3P28140_001	Banana	plasma membrane	55.78	44.72
GSMUA_Achr6P08840_001	Banana	plasma membrane	54.77	44.48
GSMUA_Achr2P23200_001	Banana	plasma membrane	57.0	44.32
GSMUA_Achr9P14620_001	Banana	plasma membrane	57.4	40.37
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	52.33	40.0
GSMUA_Achr9P19160_001	Banana	plasma membrane	50.51	39.97
GSMUA_Achr1P09620_001	Banana	plasma membrane	56.59	39.8
GSMUA_Achr1P16110_001	Banana	plasma membrane	54.16	39.67
GSMUA_Achr3P06260_001	Banana	plasma membrane	55.17	39.59
GSMUA_Achr3P04810_001	Banana	plasma membrane	50.91	38.85
GSMUA_Achr7P06010_001	Banana	plasma membrane	55.98	38.17
GSMUA_Achr6P00440_001	Banana	plasma membrane	45.44	37.33
GSMUA_Achr2P22230_001	Banana	plasma membrane	52.74	35.91
GSMUA_Achr10P...	Banana	golgi, vacuole	25.36	35.61
GSMUA_Achr4P02060_001	Banana	cytosol	31.44	31.25
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	25.96	29.98
GSMUA_Achr4P22330_001	Banana	plastid	32.05	28.42
GSMUA_Achr3P04890_001	Banana	plasma membrane	31.03	25.8
GSMUA_Achr5P15040_001	Banana	plasma membrane	31.64	25.45

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.3.2.1.2	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr7G17210_001	EnsemblPlants:GSMUA_Achr7P17210_001	EnsemblPlants:GSMUA_Achr7T17210_001	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M0TIA8	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF494	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
InterPro:SERK	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI000296F92F	SEG:seg	:	:	:	:

Description

Somatic embryogenesis receptor kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G17210_001]

Coordinates

chr7:+:18885961..18890674

Molecular Weight (calculated)

54569.4 Da

IEP (calculated)

5.378

GRAVY (calculated)

-0.220

Length

493 amino acids

Sequence
(BLAST)

001: MEINLDFRNF ILYRLNNNSL SGQIPQSLTS INSLQVLDLS NNNLSGEVPS TGSFSLFTPI SFANNPLLCG SGTTKPCPGS PPFSPPPPFN PPAPITSQGN
101: GVSSTGAIAG GVAAGAALLF AAPAIGFAWW RRRKPQEHFF DVPAEEDPEV NLGQLKRFSL RELQVATDSF SNKNILGRGG FGKVYKGRLA DGSLVAVKRL
201: KEERTPGGEL QFQTEVEMIS MAVHRNLLRL RGFCMTPTER LLVYPYMVNG SVASCLRERP PSQPPLDWLT RRRIALGAAR GLSYLHDHCD PKIIHRDVKA
301: ANILLDEEFE AVVGDFGLAK LMDYKDTHVT TAVRGTIGHI APEYLSTGKS SEKTDVFGYG IMLLELITGQ RAFDLARLAN DDDVMLLDWV KGLLKEKRLE
401: LLVDPDLQND YIEVEVESLI QVALLCTQGS PVDRPKMSEV VRMLEGDGLA ERWEEWQKVE VVRQEFEMAP HRNSEWIIDS TDNLHAVELS GPR

Best Arabidopsis Sequence Match ( AT1G34210.1 )
(BLAST)

001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR

Arabidopsis Description

SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.