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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G006340.1
HORVU0Hr1G021050.5
HORVU1Hr1G064780.1
HORVU2Hr1G080020.6
HORVU3Hr1G029440.1
HORVU3Hr1G029450.1
HORVU3Hr1G068000.2
HORVU3Hr1G068010.1
HORVU3Hr1G068020.2
HORVU3Hr1G090040.1
HORVU4Hr1G014760.3
HORVU4Hr1G072020.1
HORVU6Hr1G049080.7
HORVU7Hr1G068990.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 HORVU1Hr1G064780.1 AT5G48380.1 19616764
AT1G34210.1 HORVU3Hr1G090040.1 AT5G48380.1 19616764
AT1G34210.1 HORVU4Hr1G014760.3 AT5G48380.1 19616764
AT1G71830.1 HORVU2Hr1G080020.6 AT1G71830.1 11397085
AT1G71830.1 HORVU6Hr1G049080.7 AT1G71830.1 11397085
AT1G71830.1 HORVU7Hr1G068990.2 AT1G71830.1 11397085
AT1G71830.1 HORVU2Hr1G080020.6 AT1G71830.1 16621602
AT1G71830.1 HORVU6Hr1G049080.7 AT1G71830.1 16621602
AT1G71830.1 HORVU7Hr1G068990.2 AT1G71830.1 16621602
AT1G71830.1 HORVU0Hr1G021050.5 AT2G33500.1 16473966
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 15592873
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 15592873
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 15592873
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 16473966
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 16473966
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 16473966
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 16621602
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 16621602
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 16621602
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 17693538
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 17693538
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 17693538
AT1G71830.1 HORVU4Hr1G072020.1 AT3G54840.1 16621602
AT1G71830.1 HORVU3Hr1G068000.2 AT4G39400.1 16473966
AT1G71830.1 HORVU3Hr1G068010.1 AT4G39400.1 16473966
AT1G71830.1 HORVU3Hr1G068020.2 AT4G39400.1 16473966
AT2G13790.1 HORVU3Hr1G068000.2 AT4G39400.1 17600708
AT2G13790.1 HORVU3Hr1G068010.1 AT4G39400.1 17600708
AT2G13790.1 HORVU3Hr1G068020.2 AT4G39400.1 17600708
AT2G13790.1 HORVU1Hr1G064780.1 AT5G48380.1 19616764
AT2G13790.1 HORVU3Hr1G090040.1 AT5G48380.1 19616764
AT2G13790.1 HORVU4Hr1G014760.3 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G321400.1 Wheat mitochondrion 85.31 96.33
TraesCS2B01G340700.1 Wheat plasma membrane 85.17 96.17
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 85.03 96.01
Os04t0457800-01 Rice plasma membrane 80.79 91.08
Zm00001d025580_P001 Maize plasma membrane 77.82 88.59
HORVU6Hr1G049080.7 Barley plasma membrane 78.25 88.22
EES12285 Sorghum plasma membrane 77.4 88.1
GSMUA_Achr7P17210_001 Banana cytosol 60.59 87.02
GSMUA_Achr2P14850_001 Banana plastid 74.86 84.8
VIT_07s0031g01410.t01 Wine grape plasma membrane 74.58 84.62
VIT_18s0164g00070.t01 Wine grape plasma membrane 74.15 84.13
KRH35013 Soybean plasma membrane 73.59 83.49
KRG91762 Soybean plasma membrane 73.59 83.49
GSMUA_AchrUn_... Banana plasma membrane 74.15 83.33
Solyc04g072570.2.1 Tomato extracellular 73.59 82.83
KRH70218 Soybean endoplasmic reticulum 72.88 82.69
GSMUA_Achr7P11620_001 Banana plasma membrane 75.0 82.58
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 60.31 82.43
Bra003911.1-P Field mustard plasma membrane 66.38 82.31
CDY36679 Canola plasma membrane 72.18 82.29
GSMUA_Achr10P... Banana plasma membrane 72.6 82.11
AT1G34210.1 Thale cress plasma membrane 72.32 81.53
CDX96350 Canola plasma membrane 71.89 81.44
CDX72833 Canola plasma membrane 71.75 81.28
AT1G71830.1 Thale cress plasma membrane 71.47 80.96
Bra037006.1-P Field mustard mitochondrion 54.66 80.79
KRH10503 Soybean cytosol, plastid 53.25 80.56
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 59.6 80.38
HORVU7Hr1G068990.2 Barley mitochondrion 75.85 79.67
Solyc01g104970.2.1 Tomato plasma membrane 68.93 79.22
PGSC0003DMT400070819 Potato plasma membrane 70.76 79.02
Solyc10g047140.1.1 Tomato plasma membrane 67.66 77.89
VIT_12s0055g01160.t01 Wine grape plasma membrane 67.09 77.87
CDX72403 Canola plasma membrane 66.24 77.78
Bra016112.1-P Field mustard plasma membrane 66.67 77.76
CDY45042 Canola plasma membrane 67.09 77.61
CDY46116 Canola plasma membrane 66.1 77.61
Bra034562.1-P Field mustard plasma membrane 61.86 77.39
Bra011439.1-P Field mustard plasma membrane 56.64 77.12
KRH43924 Soybean plasma membrane 67.09 77.11
CDX68975 Canola plasma membrane 66.95 77.07
CDX75351 Canola plasma membrane 66.95 76.95
GSMUA_Achr10P... Banana mitochondrion 76.27 74.48
VIT_12s0055g01280.t01 Wine grape plasma membrane 53.95 74.46
AT4G33430.2 Thale cress plasma membrane 67.8 72.51
AT2G13790.1 Thale cress plasma membrane 63.42 72.42
CDY28301 Canola plasma membrane 40.54 72.29
KRH58311 Soybean plasma membrane 62.85 71.66
Bra032128.1-P Field mustard cytosol 48.45 70.43
CDX68299 Canola plasma membrane 69.63 69.53
CDX89615 Canola plasma membrane 59.6 69.18
AT2G13800.3 Thale cress plasma membrane 58.62 69.05
CDX93126 Canola plasma membrane 59.46 69.02
CDY48450 Canola plasma membrane 59.46 68.79
Bra041056.1-P Field mustard plasma membrane 50.14 68.67
VIT_12s0055g01150.t01 Wine grape plasma membrane 57.91 67.43
Bra032125.1-P Field mustard plasma membrane 50.14 66.11
CDX71165 Canola plasma membrane 57.63 66.02
KRH42193 Soybean plasma membrane 56.92 65.42
CDY39690 Canola cytosol 55.51 64.74
KRH58312 Soybean plasma membrane 55.93 64.39
HORVU6Hr1G074570.6 Barley cytosol 30.65 60.28
HORVU4Hr1G029640.2 Barley cytosol 20.9 59.44
Bra013136.1-P Field mustard plasma membrane 47.6 58.3
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 22.03 52.53
HORVU7Hr1G083870.7 Barley cytosol 15.11 52.2
HORVU7Hr1G043030.2 Barley plasma membrane 45.34 51.36
HORVU6Hr1G093140.1 Barley mitochondrion, plastid 19.63 50.92
HORVU3Hr1G016240.5 Barley plasma membrane 45.06 50.32
HORVU1Hr1G006020.20 Barley endoplasmic reticulum, plasma membrane 16.67 47.97
HORVU6Hr1G072620.29 Barley plasma membrane 46.05 47.25
HORVU7Hr1G028160.13 Barley plasma membrane 40.4 46.89
HORVU3Hr1G073960.5 Barley plastid 44.92 43.62
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 43.36 43.3
HORVU7Hr1G044510.5 Barley cytosol 32.63 38.69
HORVU1Hr1G025280.2 Barley mitochondrion, plasma membrane, plastid, vacuole 36.3 35.84
HORVU3Hr1G033790.1 Barley golgi, plasma membrane 17.37 35.34
HORVU4Hr1G060740.1 Barley plasma membrane 27.68 33.22
HORVU5Hr1G000980.2 Barley plastid 24.15 25.45
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A287IL83GO:GO:0000003
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0009605GO:GO:0009607GO:GO:0009719GO:GO:0009742GO:GO:0009790GO:GO:0009791
GO:GO:0009987GO:GO:0010262GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0040007GO:GO:0040008GO:GO:0045089GO:GO:1900150
EnsemblPlantsGene:HORVU2Hr1G080020EnsemblPlants:HORVU2Hr1G080020.6InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27001PANTHER:PTHR27001:SF494InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI000B474CA7SEG:seg:::
Description
No Description!
Coordinates
chrchr2H:-:579098645..579104743
Molecular Weight (calculated)
67461.9 Da
IEP (calculated)
5.694
GRAVY (calculated)
-0.145
Length
708 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXAAAAVL
101: SLVLAVSRVA ANTEGDALYS LRQSLKDANN VLQSWDPTLV NPCTWFHVTC NTDNSVIRVD LGNAQLSGAL VSQLGQLKNL QYLELYSNNI SGIIPLELGN
201: LTNLVSLDLY LNKFTGGIPD TLGQLLKLRF LRLNNNSLSG QIPQSLTNIS TLQVLDLSNN NLSGEVPSTG SFSLFTPISF GNNPNLCGPG TTKPCPGAPP
301: FSPPPPFNPP TPVTNQGDSK TGAIAGGVAA GAALIFAVPA IGFALWRRRK PEEHFFDVPA EEDPEVHLGQ LKRFSLRELQ VASDNFSNKN ILGRGGFGKV
401: YKGRLTDGTL VAVKRLKEER TPGGELQFQT EVEMISMAVH RNLLRLRGFC MTPTERLLVY PYMANGSVAS RLRERGPNEP ALEWEKRTRI ALGSARGLSY
501: LHDHCDPKII HRDVKAANIL LDEDFEAVVG DFGLAKLMDY KDTHVTTAVR GTIGHIAPEY LSTGKSSEKT DVFGYGIMLL ELITGQRAFD LARLANDDDV
601: MLLDWVKGLL KEKKVEMLVD PDLQSVYVEH EVEALIQVAL LCTQGSPMDR PKMSEVVRML EGDGLAERWE EWQKVEVVRQ EAELAPRHND WIVDSTFNLR
701: AVELSGPR
Best Arabidopsis Sequence Match ( AT1G34210.1 )
(BLAST)
001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR
Arabidopsis Description
SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.