Factsheet for HORVU0Hr1G021050.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU4Hr1G062890.2
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G28050.1	HORVU4Hr1G062890.2	AT3G48590.1	17138697
AT1G28050.1	HORVU4Hr1G062890.2	AT5G63470.1	17138697
AT2G33500.1	HORVU0Hr1G018470.1	AT1G71230.1	21798944
AT2G33500.1	HORVU0Hr1G025410.1	AT1G71230.1	21798944
AT2G33500.1	HORVU1Hr1G008160.1	AT1G71230.1	21798944
AT2G33500.1	HORVU2Hr1G056160.5	AT1G71230.1	21798944
AT2G33500.1	HORVU2Hr1G067660.1	AT1G71230.1	21798944
AT2G33500.1	HORVU2Hr1G112000.1	AT1G71230.1	21798944
AT2G33500.1	HORVU3Hr1G021300.1	AT1G71230.1	21798944
AT2G33500.1	HORVU3Hr1G054660.1	AT1G71230.1	21798944
AT2G33500.1	HORVU3Hr1G113750.1	AT1G71230.1	21798944
AT2G33500.1	HORVU4Hr1G047410.2	AT1G71230.1	21798944
AT2G33500.1	HORVU4Hr1G048730.1	AT1G71230.1	21798944
AT2G33500.1	HORVU6Hr1G023630.1	AT1G71230.1	21798944
AT2G33500.1	HORVU7Hr1G078010.1	AT1G71230.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G161500.1	Wheat	nucleus	85.34	73.98
TraesCS7D01G264300.1	Wheat	nucleus	85.34	73.82
TraesCS7A01G263500.1	Wheat	nucleus	84.63	73.06
Os08t0536300-01	Rice	nucleus	63.36	54.92
EES14176	Sorghum	nucleus	63.12	54.49
Zm00001d031662_P001	Maize	nucleus	61.23	52.97
CDY48428	Canola	nucleus	21.28	33.33
GSMUA_Achr6P06130_001	Banana	nucleus	34.99	33.26
VIT_14s0068g01380.t01	Wine grape	nucleus	26.48	24.94
VIT_01s0146g00360.t01	Wine grape	nucleus	26.95	24.31
CDY30385	Canola	nucleus	21.99	24.03
CDY15696	Canola	nucleus	16.31	23.88
CDY68819	Canola	nucleus	21.75	23.77
CDY11755	Canola	nucleus	21.99	23.66
CDY66639	Canola	nucleus	22.22	23.33
Bra041077.1-P	Field mustard	nucleus	22.22	23.04
Solyc05g024010.2.1	Tomato	nucleus	24.35	22.79
PGSC0003DMT400065377	Potato	nucleus	24.35	22.74
Bra030070.1-P	Field mustard	nucleus	16.31	22.4
KRH06865	Soybean	nucleus	19.62	21.78
Bra010908.1-P	Field mustard	nucleus	21.28	21.53
CDX90119	Canola	nucleus	20.8	21.0
KRG94656	Soybean	nucleus	18.68	20.52
AT2G33500.1	Thale cress	nucleus	19.39	20.4
AT1G28050.1	Thale cress	nucleus	20.8	20.32
HORVU6Hr1G071950.2	Barley	nucleus	13.0	14.4
HORVU7Hr1G027560.1	Barley	nucleus	8.27	14.17
HORVU2Hr1G020760.2	Barley	cytosol, mitochondrion	12.29	13.1
HORVU4Hr1G048700.1	Barley	nucleus, plastid	13.71	12.45
HORVU6Hr1G056000.2	Barley	nucleus	8.04	10.69
HORVU0Hr1G022380.1	Barley	cytosol	1.18	1.76

Protein Annotations

EnsemblPlants:HORVU0Hr1G021050.5	EnsemblPlantsGene:HORVU0Hr1G021050	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008270	InterPro:CCT_domain	InterPro:IPR010402
PANTHER:PTHR31717	PANTHER:PTHR31717:SF20	PFAM:PF06203	PFscan:PS51017	SEG:seg	UniParc:UPI000B4627C1
UniProt:A0A287E6I2	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:110179501..110183094

Molecular Weight (calculated)

42109.0 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.693

Length

423 amino acids

Sequence
(BLAST)

001: RFSPDPTXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSRARRVDLL PGGGGAAAFG CGLGTGAGQE DEDAFFFSSL DYSMLVDPEM RDLYVPCNPP
101: EVAVSAGGGR PLKGEALCDQ LAEMARRETD TSQPQGYSDL SPRTPRRSSA GSSGRLPDKQ PPPPLPPAPE VPCPYTSLLM MPSAHCAELV GNDRLPDDDE
201: EQLRWEFAPP SSVPPTQIWD FNLGRSRNHN EKSAHEVGFG SNNGGFMIKS YSDMLKEISC GTTKDLEDIY DSGYGAAAED IMSTNICQVP SKNVSTASNK
301: RMKVSSCTST MDGPTTSGSN VPASGTLASS SHDRGAAPTR EISFGDQTIV PTGAERPTTR IDSETLALNR DSAMQRYKEK RKNRRYEKHI RYESRKLRAD
401: TRKRVKGRFV KSNEALNAGS NGG

Best Arabidopsis Sequence Match ( AT2G33500.2 )
(BLAST)

001: MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQE DSVHSTSTKG
301: QETSKSNNIP AAIHSHKSSN DSCGLHCTEH IAITSNRATR LVAVTNADLE QMAQNRDNAM QRYKEKKKTR RYDKTIRYET RKARAETRLR VKGRFVKATD
401: P

Arabidopsis Description

COL14Zinc finger protein CONSTANS-LIKE 14 [Source:UniProtKB/Swiss-Prot;Acc:O22800]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.