Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G264300.1 | Wheat | nucleus | 97.96 | 98.16 |
| TraesCS7B01G161500.1 | Wheat | nucleus | 96.94 | 97.34 |
| HORVU0Hr1G021050.5 | Barley | cytosol | 73.06 | 84.63 |
| Os08t0536300-01 | Rice | nucleus | 74.08 | 74.39 |
| EES14176 | Sorghum | nucleus | 71.43 | 71.43 |
| Zm00001d031662_P001 | Maize | nucleus | 70.41 | 70.55 |
| GSMUA_Achr6P06130_001 | Banana | nucleus | 41.22 | 45.39 |
| CDY15696 | Canola | nucleus | 24.29 | 41.18 |
| Bra030070.1-P | Field mustard | nucleus | 24.29 | 38.64 |
| CDY30385 | Canola | nucleus | 29.18 | 36.95 |
| CDY68819 | Canola | nucleus | 29.18 | 36.95 |
| CDY11755 | Canola | nucleus | 28.98 | 36.13 |
| Bra041077.1-P | Field mustard | nucleus | 29.59 | 35.54 |
| CDY66639 | Canola | nucleus | 29.18 | 35.48 |
| VIT_01s0146g00360.t01 | Wine grape | nucleus | 32.24 | 33.69 |
| VIT_14s0068g01380.t01 | Wine grape | nucleus | 30.82 | 33.63 |
| Bra010908.1-P | Field mustard | nucleus | 28.16 | 33.01 |
| CDY48428 | Canola | nucleus | 17.96 | 32.59 |
| PGSC0003DMT400065377 | Potato | nucleus | 30.0 | 32.45 |
| Solyc05g024010.2.1 | Tomato | nucleus | 29.8 | 32.3 |
| CDX90119 | Canola | nucleus | 27.55 | 32.22 |
| AT2G33500.1 | Thale cress | nucleus | 26.12 | 31.84 |
| KRH06865 | Soybean | nucleus | 24.69 | 31.76 |
| KRG94656 | Soybean | nucleus | 24.69 | 31.43 |
| AT1G28050.1 | Thale cress | nucleus | 27.55 | 31.18 |
| TraesCS2A01G119600.1 | Wheat | nucleus | 20.61 | 26.44 |
| TraesCS4A01G140600.1 | Wheat | nucleus | 21.84 | 25.97 |
| TraesCS2A01G353900.1 | Wheat | nucleus | 16.53 | 25.63 |
| TraesCS6A01G286400.3 | Wheat | nucleus | 19.39 | 24.36 |
| TraesCS7A01G218600.1 | Wheat | nucleus | 19.59 | 24.24 |
| TraesCS6A01G218900.1 | Wheat | nucleus | 15.51 | 23.68 |
| TraesCS7A01G497200.1 | Wheat | nucleus | 15.51 | 20.43 |
| TraesCS6A01G289400.1 | Wheat | nucleus | 15.31 | 20.33 |
| TraesCS7A01G132100.1 | Wheat | nucleus | 10.2 | 20.08 |
| TraesCS6A01G150900.2 | Wheat | mitochondrion | 14.9 | 20.0 |
| TraesCS7A01G211300.1 | Wheat | nucleus | 15.31 | 19.48 |
| TraesCS5A01G166100.1 | Wheat | nucleus | 12.24 | 18.4 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G263500.1 | EnsemblPlantsGene:TraesCS7A01G263500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:CCT_domain | InterPro:IPR000315 | InterPro:IPR010402 |
| InterPro:Znf_B-box | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF20 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 |
| SEG:seg | SMART:SM00336 | TIGR:cd00021 | MapMan:15.5.1.2 | : | : |
Description
No Description!
Coordinates
chr7A:-:261221850..261225579
Molecular Weight (calculated)
52007.8 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.520
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDSVGTRQH WPCDYCGEAA AALHCRADAA RLCVACDRHV HAANALSRKH VRAPLCAGCA ARPAAARVAA GGGEPAFLCA DCDGGCEGAA RVPVEGFAGC
101: PAASELAASW GVDLLPGAGA AAAFGCGLGG GGGDQEDEDA FFFSSLDYSM LVDPEMRDLY VPCNPPEVAV SAGGGRPLKG EALCHQLAEM ARRETETSQP
201: QGYSDLSPRT PRRSSAGASG RLPDKQAPPP LPPAPEVPCP YTSLLMMPSA HCAELIGNDR LRDDDEEQLR WEFAPPSSVP PTQIWDFNLG RSRNHNEKTA
301: HEIGFGSNNG GFMIKSYSDM LKEISCGTTK DLEDIYDSGY GAAAEDIMST NICQVPSKNV STASNKRMKV SSCTSTMDGP TTSGSHVPAS GGALGSSSHD
401: RGAAPAREIS FGDQTIVPTG PERPAARIDS ETLALNRDSA MQRYKEKRKN RRYEKHIRYE SRKLRADTRE RVKGRFVKSN EALNAGSNGG
101: PAASELAASW GVDLLPGAGA AAAFGCGLGG GGGDQEDEDA FFFSSLDYSM LVDPEMRDLY VPCNPPEVAV SAGGGRPLKG EALCHQLAEM ARRETETSQP
201: QGYSDLSPRT PRRSSAGASG RLPDKQAPPP LPPAPEVPCP YTSLLMMPSA HCAELIGNDR LRDDDEEQLR WEFAPPSSVP PTQIWDFNLG RSRNHNEKTA
301: HEIGFGSNNG GFMIKSYSDM LKEISCGTTK DLEDIYDSGY GAAAEDIMST NICQVPSKNV STASNKRMKV SSCTSTMDGP TTSGSHVPAS GGALGSSSHD
401: RGAAPAREIS FGDQTIVPTG PERPAARIDS ETLALNRDSA MQRYKEKRKN RRYEKHIRYE SRKLRADTRE RVKGRFVKSN EALNAGSNGG
001: MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQQ EDSVHSTSTK
301: GQETSKSNNI PAAIHSHKSS NDSCGLHCTE HIAITSNRAT RLVAVTNADL EQMAQNRDNA MQRYKEKKKT RRYDKTIRYE TRKARAETRL RVKGRFVKAT
401: DP
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQQ EDSVHSTSTK
301: GQETSKSNNI PAAIHSHKSS NDSCGLHCTE HIAITSNRAT RLVAVTNADL EQMAQNRDNA MQRYKEKKKT RRYDKTIRYE TRKARAETRL RVKGRFVKAT
401: DP
Arabidopsis Description
COL14Zinc finger protein CONSTANS-LIKE 14 [Source:UniProtKB/Swiss-Prot;Acc:O22800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.