Factsheet for Os08t0536300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G264300.1	Wheat	nucleus	75.0	74.85
TraesCS7B01G161500.1	Wheat	nucleus	74.8	74.8
TraesCS7A01G263500.1	Wheat	nucleus	74.39	74.08
EES14176	Sorghum	nucleus	72.54	72.24
Zm00001d031662_P001	Maize	nucleus	69.88	69.73
HORVU0Hr1G021050.5	Barley	cytosol	54.92	63.36
Os09t0509700-01	Rice	nucleus	52.87	59.86
GSMUA_Achr6P06130_001	Banana	nucleus	40.98	44.94
Os06t0654900-01	Rice	nucleus	5.94	35.8
Os07t0667300-01	Rice	nucleus	22.95	29.47
Os03t0351100-01	Rice	nucleus	22.34	27.05
Os04t0497700-01	Rice	nucleus	16.6	24.32
Os02t0724000-01	Rice	nucleus	20.29	24.32
Os06t0298200-01	Rice	nucleus	20.29	24.26
Os02t0610500-01	Rice	nucleus	16.39	24.1
Os02t0178100-01	Rice	nucleus	14.96	22.05
Os06t0275000-01	Rice	mitochondrion	16.6	20.51
Os09t0240200-01	Rice	nucleus	13.52	19.7
Os08t0249000-01	Rice	nucleus	3.48	9.44

Protein Annotations

MapMan:15.5.1.2	EntrezGene:4346162	ProteinID:BAD01231.1	ProteinID:BAD13116.1	ProteinID:BAF24277.2	ProteinID:BAT06449.1
InterPro:CCT_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008270	InterPro:IPR000315	InterPro:IPR010402	EnsemblPlantsGene:Os08g0536300
EnsemblPlants:Os08t0536300-01	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017	PANTHER:PTHR31717	PANTHER:PTHR31717:SF20
UniProt:Q6Z1G2	SMART:SM00336	UniParc:UPI0000212FA9	RefSeq:XP_015649825.1	InterPro:Znf_B-box	SEG:seg

Description

B-box-containing protein 26, CCT domain-containing gene 30, CCT (CO, CO-LIKE and TOC1) domain protein 30, CCT domain protein 30Similar to Hd1. (Os08t0536300-01)

Coordinates

chr8:-:26792942..26797114

Molecular Weight (calculated)

51866.5 Da

IEP (calculated)

6.630

GRAVY (calculated)

-0.547

Length

488 amino acids

Sequence
(BLAST)

001: MKDGGGGGGR GQQQQWPCDY CGEAAAALHC RADAARLCVA CDRHVHAANA LSRKHVRAPL CAACAARPAA ARVASASAPA FLCADCDTGC GGDDGAALRV
101: PVEGFSGCPA AAELAASWGL DLPGGCGGEE EEADDAFFSA LDYSMLAVDP VLRDLYVPCD PPEVVVAGGG RRLKGEALGH QLAEMARREA ETAHPHTQPH
201: SDLSPRTPRR TSAAASGRLQ EKQAPPPLPH AAATAAPLPY TSLLMMAPAN CTELMENNRV GDEDENVLWE STAPSVPPTQ IWDFNLGKSR DHNENSALEV
301: GFGSNNGGFM IKSYNDMLKE ISSGTTKDLE DIYDSRYFAA AEDIMSTNVC QLSSKNPSTR SNKRKASSCA STIDGPTTST SHVPAASGAL GGSSNDRGSA
401: LPKEISFCDQ TVVPTGADQR PCTIKIDSET LAQNRDSAMQ RYREKKKNRR YEKHIRYESR KLRADTRKRV KGRFVKSNGA PDDVSNGG

Best Arabidopsis Sequence Match ( AT2G33500.2 )
(BLAST)

001: MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQE DSVHSTSTKG
301: QETSKSNNIP AAIHSHKSSN DSCGLHCTEH IAITSNRATR LVAVTNADLE QMAQNRDNAM QRYKEKKKTR RYDKTIRYET RKARAETRLR VKGRFVKATD
401: P

Arabidopsis Description

COL14Zinc finger protein CONSTANS-LIKE 14 [Source:UniProtKB/Swiss-Prot;Acc:O22800]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.