Factsheet for Os08t0249000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G032800.1	Wheat	nucleus	50.56	37.45
Zm00001d024200_P001	Maize	nucleus	57.22	37.05
EES14798	Sorghum	nucleus	60.0	36.99
TraesCS7A01G132100.1	Wheat	nucleus	50.56	36.55
HORVU7Hr1G027560.1	Barley	nucleus	49.44	36.03
TraesCS7D01G131700.1	Wheat	nucleus	49.44	35.6
Zm00001d049347_P001	Maize	nucleus	55.0	35.48
Os04t0497700-01	Rice	nucleus	27.78	15.02
Os02t0610500-01	Rice	nucleus	25.56	13.86
Os02t0178100-01	Rice	nucleus	21.67	11.78
Os09t0240200-01	Rice	nucleus	21.11	11.34
Os06t0654900-01	Rice	nucleus	4.44	9.88
Os06t0275000-01	Rice	mitochondrion	21.11	9.62
Os02t0724000-01	Rice	nucleus	10.0	4.42
Os06t0298200-01	Rice	nucleus	10.0	4.41
Os09t0509700-01	Rice	nucleus	10.0	4.18
Os03t0351100-01	Rice	nucleus	8.33	3.72
Os07t0667300-01	Rice	nucleus	7.78	3.68
Os08t0536300-01	Rice	nucleus	9.44	3.48

Protein Annotations

InterPro:2Fe2S_fd_BS	MapMan:35.2	ProteinID:BAD05684.1	ProteinID:BAD05841.1	ProteinID:BAF23283.1	ProteinID:BAT04548.1
GO:GO:0000989	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009628	GO:GO:0009640	GO:GO:0009791	GO:GO:0009987
GO:GO:0051537	InterPro:IPR000315	EnsemblPlantsGene:Os08g0249000	EnsemblPlants:Os08t0249000-01	ScanProsite:PS00197	PFscan:PS50119
PANTHER:PTHR31319	PANTHER:PTHR31319:SF35	UniProt:Q6YW25	SMART:SM00336	UniParc:UPI000022F2D4	InterPro:Znf_B-box
SEG:seg	:	:	:	:	:

Description

B-box-containing protein 25, CCT domain-containing gene 29, CCT (CO, CO-LIKE and TOC1) domain protein 29, CCT domain protein 29Zinc finger, B-box domain containing protein. (Os08t0249000-01)

Coordinates

chr8:+:9098485..9099878

Molecular Weight (calculated)

17048.1 Da

IEP (calculated)

3.848

GRAVY (calculated)

0.183

Length

180 amino acids

Sequence
(BLAST)

001: MMASDGSASP ASCGGAACGV CGGAATVYCA ADAAALCVPC DAAVHAANPL ASRHDRVPLA VAMAAASSGV YDHLFAPDDD AASSWAAAAA AGAAVQGQGQ
101: GSPNDSSSSF TNDSAAASSS SDDDSTAAAG VSGAGGAGAA ATKEAKFWLS FSDDGRADGV GFYMDSTTAA TAAYGVVPTF

Best Arabidopsis Sequence Match ( AT5G57660.1 )
(BLAST)

001: MGFGLESIKS ISGGWGAAAR SCDACKSVTA AVFCRVDSAF LCIACDTRIH SFTRHERVWV CEVCEQAPAA VTCKADAAAL CVSCDADIHS ANPLASRHER
101: VPVETFFDSA ETAVAKISAS STFGILGSST TVDLTAVPVM ADDLGLCPWL LPNDFNEPAK IEIGTENMKG SSDFMFSDFD RLIDFEFPNS FNHHQNNAGG
201: DSLVPVQTKT EPLPLTNNDH CFDIDFCRSK LSAFTYPSQS VSHSVSTSSI EYGVVPDGNT NNSVNRSTIT SSTTGGDHQA SSMDREARVL RYREKRKNRK
301: FEKTIRYASR KAYAESRPRI KGRFAKRTET ENDDIFLSHV YASAAHAQYG VVPTF

Arabidopsis Description

COL5Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.