Factsheet for Os09t0240200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G166100.1	Wheat	nucleus	69.25	71.17
TraesCS5D01G170700.1	Wheat	nucleus	68.96	71.08
TraesCS5B01G163500.1	Wheat	nucleus	68.06	70.15
Os06t0654900-01	Rice	nucleus	15.22	62.96
KRH52295	Soybean	nucleus, plastid	30.45	32.9
KRH61628	Soybean	nucleus, plastid	29.85	32.36
Os04t0497700-01	Rice	nucleus	31.94	32.13
Os02t0610500-01	Rice	nucleus	31.34	31.63
PGSC0003DMT400068637	Potato	nucleus	23.88	30.19
Os02t0178100-01	Rice	nucleus	29.55	29.91
PGSC0003DMT400016342	Potato	nucleus	23.28	29.55
PGSC0003DMT400092769	Potato	nucleus	21.19	27.41
Os06t0275000-01	Rice	mitochondrion	31.94	27.09
Os08t0249000-01	Rice	nucleus	11.34	21.11
Os09t0509700-01	Rice	nucleus	18.81	14.62
Os07t0667300-01	Rice	nucleus	16.42	14.47
Os06t0298200-01	Rice	nucleus	17.61	14.46
Os02t0724000-01	Rice	nucleus	16.72	13.76
Os08t0536300-01	Rice	nucleus	19.7	13.52
Os03t0351100-01	Rice	nucleus	15.22	12.66

Protein Annotations

MapMan:35.1	EntrezGene:4346474	EMBL:AB001887	ProteinID:BAD36814.1	ProteinID:BAF24557.1	ProteinID:BAT06983.1
InterPro:CCT_domain	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	GO:GO:0009987
GO:GO:0046872	GO:GO:0048577	InterPro:IPR000315	InterPro:IPR010402	UniProt:O82117	EnsemblPlantsGene:Os09g0240200
EnsemblPlants:Os09t0240200-01	PFAM:PF00643	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017	PANTHER:PTHR31319
PANTHER:PTHR31319:SF39	SMART:SM00336	UniParc:UPI00000A7763	RefSeq:XP_015612389.1	InterPro:Znf_B-box	SEG:seg

Description

CONSTANS-like gene B, B-box-containing protein 27, CCT domain-containing gene 31, CCT (CO, CO-LIKE and TOC1) domain protein 31, CCT domain protein 31Zinc finger, B-box domain containing protein. (Os09t0240200-01)

Coordinates

chr9:-:3048085..3064471

Molecular Weight (calculated)

36083.8 Da

IEP (calculated)

5.272

GRAVY (calculated)

-0.469

Length

335 amino acids

Sequence
(BLAST)

001: MLKLEPEFPG LPQRCDSCRS APCAFYCLAD SAALCATCDA DVHSVNPLAR RHRRVPMGVV AAPGAGGAFV VRPAGGVNSS WPIREGRRCD YDDDDADAAG
101: EEDEEATSWL LFDPLKDSSD QGLPPFGDAL VADFLNLGGG AGEKEDASSS KDCSSSHGKS SEGSHEFAVP GEPVPERQGF GAVSMDITDY DASNFRRGYS
201: FGASLGHSVS MSSLENMSTV PDCGVPDITT SYLRSSKSTI DLFTAAAGSP VAAHSIMSPP QFMGAIDREA RVHRYREKRK TRRFEKTIRY ASRKAYAETR
301: PRIKGRFAKR SDTDLEVDQY FSTTADSSCG VVPTF

Best Arabidopsis Sequence Match ( AT3G02380.1 )
(BLAST)

001: MLKEESNESG TWARACDTCR SAACTVYCEA DSAYLCTTCD ARVHAANRVA SRHERVRVCQ SCESAPAAFL CKADAASLCT ACDAEIHSAN PLARRHQRVP
101: ILPLSANSCS SMAPSETDAD NDEDDREVAS WLLPNPGKNI GNQNNGFLFG VEYLDLVDYS SSMDNQFEDN QYTHYQRSFG GDGVVPLQVE ESTSHLQQSQ
201: QNFQLGINYG FSSGAHYNNN SLKDLNHSAS VSSMDISVVP ESTASDITVQ HPRTTKETID QLSGPPTQVV QQLTPMEREA RVLRYREKKK TRKFDKTIRY
301: ASRKAYAEIR PRIKGRFAKR IETEAEAEEI FSTSLMSETG YGIVPSF

Arabidopsis Description

COL2Zinc finger protein CONSTANS-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q96502]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.