Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94860 | Sorghum | nucleus | 67.0 | 65.38 |
| TraesCS4D01G167300.1 | Wheat | nucleus | 64.27 | 65.24 |
| TraesCS4A01G140600.1 | Wheat | nucleus | 66.5 | 65.05 |
| TraesCS4B01G155800.1 | Wheat | nucleus | 64.02 | 64.99 |
| Zm00001d029149_P001 | Maize | nucleus | 63.77 | 64.74 |
| HORVU4Hr1G048700.1 | Barley | nucleus, plastid | 65.76 | 56.87 |
| Os07t0667300-01 | Rice | nucleus | 49.38 | 52.37 |
| GSMUA_Achr6P13590_001 | Banana | cytosol, mitochondrion, nucleus | 7.94 | 35.96 |
| KRH68113 | Soybean | nucleus | 28.29 | 32.66 |
| KRG96381 | Soybean | nucleus | 28.29 | 32.48 |
| AT2G47890.1 | Thale cress | nucleus | 26.55 | 32.23 |
| Os06t0654900-01 | Rice | nucleus | 6.45 | 32.1 |
| PGSC0003DMT400029591 | Potato | nucleus | 29.78 | 31.66 |
| Solyc09g074560.2.1 | Tomato | nucleus | 29.28 | 31.64 |
| KRH31920 | Soybean | nucleus | 27.3 | 31.61 |
| CDY53026 | Canola | nucleus | 25.81 | 31.14 |
| VIT_07s0104g01360.t01 | Wine grape | nucleus | 30.27 | 30.96 |
| Bra004423.1-P | Field mustard | nucleus | 25.56 | 30.84 |
| CDX80141 | Canola | nucleus | 25.31 | 30.72 |
| KRH71535 | Soybean | nucleus | 25.81 | 30.59 |
| Os09t0509700-01 | Rice | nucleus | 25.56 | 23.9 |
| Os02t0610500-01 | Rice | nucleus | 19.11 | 23.19 |
| Os08t0536300-01 | Rice | nucleus | 27.05 | 22.34 |
| Os04t0497700-01 | Rice | nucleus | 18.11 | 21.92 |
| Os06t0298200-01 | Rice | nucleus | 21.84 | 21.57 |
| Os02t0724000-01 | Rice | nucleus | 20.35 | 20.15 |
| Os02t0178100-01 | Rice | nucleus | 14.64 | 17.82 |
| Os06t0275000-01 | Rice | mitochondrion | 17.37 | 17.72 |
| Os09t0240200-01 | Rice | nucleus | 12.66 | 15.22 |
| Os08t0249000-01 | Rice | nucleus | 3.72 | 8.33 |
Protein Annotations
| MapMan:15.5.1.2 | EntrezGene:4332842 | EMBL:AB001882 | ProteinID:ABF95931.1 | EMBL:AK099864 | EMBL:AK101822 |
| ProteinID:BAF12028.1 | ProteinID:BAS84196.1 | InterPro:CCT_domain | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008270 | InterPro:IPR000315 |
| InterPro:IPR010402 | UniProt:O82112 | EnsemblPlantsGene:Os03g0351100 | EnsemblPlants:Os03t0351100-01 | PFAM:PF06203 | PFscan:PS50119 |
| PFscan:PS51017 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF10 | SMART:SM00336 | UniParc:UPI00000ACF11 | RefSeq:XP_015632324.1 |
| InterPro:Znf_B-box | SEG:seg | : | : | : | : |
Description
CONSTANS-like gene P, B-box-containing protein 9, CCT domain-containing gene 12, CCT (CO, CO-LIKE and TOC1) domain protein 12, CCT domain protein 12Similar to CONSTANS-like protein CO9 (Fragment). (Os03t0351100-01);Similar to CONSTANS-like protein CO9 (Fragment). (Os03t0351100-02)
Coordinates
chr3:+:13153018..13155544
Molecular Weight (calculated)
43445.4 Da
IEP (calculated)
5.302
GRAVY (calculated)
-0.575
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQDEVEVGA EKKDQELPEV EVVEEEEEEG SKKAAAGCDY CGDAAAVVYC RADAARLCLP CDRHVHGANG VCSRHARAPL CAACAAAGAV FRRGAGGFLC
101: SNCDFSRHRH GGERDPAAPL HDRSTVHPYT GCPSALDLAA LLGISYSDKA AAATAAAGGD DGGWWAIWEE PQVLSLEDLI VPTTSCHGFE PLLTPSSPKI
201: QNSPDGKVNE EVIRQLTELA NSDGGGAQIW AHREAAQAGD HQLPSWGTTT QHNTGHGNFG TANSNEVATM PTPGYENGGW DNSDYPALND PCKVEFTYEQ
301: PPASSAEACI SSFVQMSELC PSMSNGSSME ETHQTNPGNG TPMQVLPKMP EFVPCPDRNL VISRYKEKRK TRRFDRQVRY ESRKARADSR LRIKGRFAKV
401: NQI
101: SNCDFSRHRH GGERDPAAPL HDRSTVHPYT GCPSALDLAA LLGISYSDKA AAATAAAGGD DGGWWAIWEE PQVLSLEDLI VPTTSCHGFE PLLTPSSPKI
201: QNSPDGKVNE EVIRQLTELA NSDGGGAQIW AHREAAQAGD HQLPSWGTTT QHNTGHGNFG TANSNEVATM PTPGYENGGW DNSDYPALND PCKVEFTYEQ
301: PPASSAEACI SSFVQMSELC PSMSNGSSME ETHQTNPGNG TPMQVLPKMP EFVPCPDRNL VISRYKEKRK TRRFDRQVRY ESRKARADSR LRIKGRFAKV
401: NQI
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.