Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004423.1-P | Field mustard | nucleus | 99.1 | 98.5 |
| CDY53026 | Canola | nucleus | 96.99 | 96.41 |
| AT2G47890.1 | Thale cress | nucleus | 69.88 | 69.88 |
| KRH68113 | Soybean | nucleus | 46.39 | 44.13 |
| KRG96381 | Soybean | nucleus | 46.39 | 43.87 |
| Solyc09g074560.2.1 | Tomato | nucleus | 48.49 | 43.16 |
| PGSC0003DMT400029591 | Potato | nucleus | 48.8 | 42.74 |
| VIT_07s0104g01360.t01 | Wine grape | nucleus | 50.0 | 42.13 |
| KRH71535 | Soybean | nucleus | 42.77 | 41.76 |
| KRH31920 | Soybean | nucleus | 43.37 | 41.38 |
| GSMUA_Achr6P13590_001 | Banana | cytosol, mitochondrion, nucleus | 9.64 | 35.96 |
| CDY15696 | Canola | nucleus | 31.02 | 35.64 |
| CDY30385 | Canola | nucleus | 34.04 | 29.2 |
| CDY69474 | Canola | nucleus, plastid | 8.43 | 29.17 |
| CDY68819 | Canola | nucleus | 33.73 | 28.94 |
| CDY66639 | Canola | nucleus | 33.73 | 27.79 |
| CDY11755 | Canola | nucleus | 32.53 | 27.48 |
| GSMUA_Achr3P08880_001 | Banana | nucleus | 33.43 | 27.21 |
| Os07t0667300-01 | Rice | nucleus | 31.02 | 27.11 |
| CDY45597 | Canola | nucleus | 22.59 | 25.95 |
| Zm00001d029149_P001 | Maize | nucleus | 31.02 | 25.94 |
| CDX90119 | Canola | nucleus | 32.53 | 25.78 |
| TraesCS2D01G121400.1 | Wheat | nucleus | 29.52 | 25.72 |
| EER94860 | Sorghum | nucleus | 31.93 | 25.67 |
| CDY36171 | Canola | nucleus | 22.29 | 25.52 |
| TraesCS2B01G140300.1 | Wheat | nucleus | 29.52 | 25.32 |
| Os03t0351100-01 | Rice | nucleus | 30.72 | 25.31 |
| Zm00001d007107_P001 | Maize | nucleus | 31.02 | 25.18 |
| TraesCS2A01G119600.1 | Wheat | nucleus | 28.92 | 25.13 |
| EER99873 | Sorghum | nucleus | 30.72 | 24.7 |
| CDY02749 | Canola | nucleus, plastid | 18.98 | 24.32 |
| TraesCS4D01G167300.1 | Wheat | nucleus | 28.92 | 24.18 |
| CDY19821 | Canola | nucleus | 21.39 | 24.15 |
| TraesCS4B01G155800.1 | Wheat | nucleus | 28.61 | 23.93 |
| CDY71884 | Canola | nucleus | 21.08 | 23.73 |
| TraesCS4A01G140600.1 | Wheat | nucleus | 29.22 | 23.54 |
| CDX88145 | Canola | nucleus | 20.78 | 23.47 |
| CDX85529 | Canola | nucleus | 22.29 | 23.34 |
| CDY71818 | Canola | nucleus | 20.78 | 23.31 |
| CDY26470 | Canola | nucleus | 23.19 | 23.12 |
| CDX69493 | Canola | nucleus | 22.89 | 22.55 |
| CDY05691 | Canola | nucleus | 23.49 | 22.48 |
| CDX90969 | Canola | nucleus | 21.69 | 22.43 |
| CDX87105 | Canola | nucleus, plastid | 21.39 | 22.4 |
| CDY48743 | Canola | nucleus | 22.89 | 21.71 |
| CDY07979 | Canola | nucleus | 22.89 | 21.59 |
| CDX85321 | Canola | nucleus | 23.19 | 21.45 |
| CDX80476 | Canola | nucleus, plastid | 21.08 | 21.28 |
| Zm00001d022500_P001 | Maize | nucleus | 11.45 | 20.99 |
| CDY26469 | Canola | nucleus | 22.89 | 20.77 |
| CDX86318 | Canola | nucleus | 22.29 | 20.67 |
| CDX69494 | Canola | nucleus | 22.89 | 20.65 |
| HORVU4Hr1G048700.1 | Barley | nucleus, plastid | 28.61 | 20.39 |
| CDY22125 | Canola | nucleus | 22.29 | 20.22 |
| CDY64255 | Canola | nucleus | 22.59 | 20.22 |
| CDY35952 | Canola | nucleus | 22.29 | 20.05 |
| CDY55657 | Canola | nucleus | 23.19 | 19.95 |
| CDY58843 | Canola | nucleus, plastid | 20.48 | 19.88 |
| CDY28029 | Canola | nucleus | 21.99 | 19.62 |
| CDY25892 | Canola | nucleus | 19.28 | 19.22 |
| CDX74034 | Canola | nucleus | 22.29 | 18.97 |
| CDY48428 | Canola | nucleus | 15.06 | 18.52 |
| CDY04213 | Canola | nucleus | 18.67 | 18.45 |
| CDX74261 | Canola | nucleus | 12.05 | 17.54 |
| CDX91989 | Canola | nucleus | 11.75 | 17.11 |
| HORVU2Hr1G020760.2 | Barley | cytosol, mitochondrion | 17.77 | 14.86 |
| CDY49730 | Canola | nucleus | 9.34 | 14.22 |
| CDY07393 | Canola | nucleus | 19.28 | 11.94 |
Protein Annotations
| MapMan:15.5.1.2 | GO:A0A078CSK3 | InterPro:CCT_domain | EnsemblPlants:CDX80141 | ProteinID:CDX80141 | ProteinID:CDX80141.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008270 | EnsemblPlantsGene:GSBRNA2T00133049001 | InterPro:IPR000315 | InterPro:IPR010402 | PFAM:PF06203 | PFscan:PS50119 |
| PFscan:PS51017 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF16 | SMART:SM00336 | UniParc:UPI0004EDE33C | InterPro:Znf_B-box |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g00150D
Coordinates
chrLK031819:+:2071241..2072794
Molecular Weight (calculated)
37583.6 Da
IEP (calculated)
6.268
GRAVY (calculated)
-0.765
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEEEEGSH QQHRICDYCE SSVALVYCKA DSAKLCLACD NQVHVTNQLF SKHFRSLLCD SCDDSPSSVF CDTESSVLCQ NCDWQHHTSA SSLHSRRPLE
101: GFSGCPSVTE LLALVGLDDL TDKALFLPHP GGGSEQTPPQ IVSLNDLVAS DGSSHNYRAM DVPPLPKNRH ATCGRHKEEM IRQLRELSRS EPSCLKYETL
201: DNDAELDTTG FLFLEPGNDL FSSTFESQVS GLKWFEDQQE DYYPYSDDNN VNQRGCCTQQ QESSPVMVPV STSTTTTRLT HEINSLERNS ALSRYKAKKK
301: SRRYEKHIRY ESRKVRAETR TRIRGRFAKS HP
101: GFSGCPSVTE LLALVGLDDL TDKALFLPHP GGGSEQTPPQ IVSLNDLVAS DGSSHNYRAM DVPPLPKNRH ATCGRHKEEM IRQLRELSRS EPSCLKYETL
201: DNDAELDTTG FLFLEPGNDL FSSTFESQVS GLKWFEDQQE DYYPYSDDNN VNQRGCCTQQ QESSPVMVPV STSTTTTRLT HEINSLERNS ALSRYKAKKK
301: SRRYEKHIRY ESRKVRAETR TRIRGRFAKS HP
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.