Factsheet for Zm00001d022500_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007107_P001	Maize	nucleus	59.12	26.16
Zm00001d029149_P001	Maize	nucleus	39.23	17.88
KRH31920	Soybean	nucleus	25.97	13.51
KRG96381	Soybean	nucleus	24.31	12.54
Solyc09g074560.2.1	Tomato	nucleus	24.86	12.06
KRH71535	Soybean	nucleus	22.65	12.06
KRH68113	Soybean	nucleus	23.2	12.03
PGSC0003DMT400029591	Potato	nucleus	24.86	11.87
AT2G47890.1	Thale cress	nucleus	21.55	11.75
CDX80141	Canola	nucleus	20.99	11.45
VIT_07s0104g01360.t01	Wine grape	nucleus	24.86	11.42
Bra004423.1-P	Field mustard	nucleus	20.99	11.38
CDY53026	Canola	nucleus	20.99	11.38
Zm00001d049347_P001	Maize	nucleus	17.13	11.11
Zm00001d003162_P001	Maize	nucleus	18.78	10.62
Zm00001d051047_P001	Maize	nucleus	18.23	10.51
Zm00001d017176_P001	Maize	nucleus	19.34	10.45
Zm00001d024200_P001	Maize	nucleus	16.02	10.43
Zm00001d025770_P001	Maize	nucleus	18.23	10.22
Zm00001d046925_P001	Maize	nucleus	19.89	9.89
Zm00001d015468_P001	Maize	mitochondrion	19.89	9.65
Zm00001d051684_P007	Maize	nucleus	20.44	9.11
Zm00001d045804_P003	Maize	nucleus	20.44	8.49
Zm00001d017885_P001	Maize	nucleus	19.89	7.81
Zm00001d045735_P002	Maize	extracellular, vacuole	17.68	7.48
Zm00001d031662_P001	Maize	nucleus	18.23	6.75
GSMUA_Achr6P13590_001	Banana	cytosol, mitochondrion, nucleus	1.1	2.25

Protein Annotations

EnsemblPlants:Zm00001d022500_P001	EnsemblPlants:Zm00001d022500_T001	EnsemblPlantsGene:Zm00001d022500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain	InterPro:IPR010402
PANTHER:PTHR31717	PANTHER:PTHR31717:SF10	PFAM:PF06203	PFscan:PS51017	ProteinID:ONM60838.1	SEG:seg
UniParc:UPI000845049D	UniProt:A0A1D6INK3	MapMan:35.2	:	:	:

Description

Zinc finger protein CONSTANS-LIKE 13

Coordinates

chr7:+:178894022..178895945

Molecular Weight (calculated)

19518.7 Da

IEP (calculated)

5.119

GRAVY (calculated)

-0.549

Length

181 amino acids

Sequence
(BLAST)

001: MEQLTPWPSP ELAAITGQYA DFGALDADTA WHDDAAAIAA AVVPSTEEEQ QAWIAAGCDV GACRTEEKAR ENDAALAEPC LSSFVEMSEI CPASVVVTLS
101: HGGDEGVDSS GKTAPRPQLA APTPAKGGYD VAYPDRGTVI SRYKEKRKNR RFDKQIRYES RKARADGRMR IKGRFAKSGE V

Best Arabidopsis Sequence Match ( AT1G28050.1 )
(BLAST)

001: MSSSERVPCD FCGERTAVLF CRADTAKLCL PCDQQVHTAN LLSRKHVRSQ ICDNCGNEPV SVRCFTDNLI LCQECDWDVH GSCSVSDAHV RSAVEGFSGC
101: PSALELAALW GLDLEQGRKD EENQVPMMAM MMDNFGMQLD SWVLGSNELI VPSDTTFKKR GSCGSSCGRY KQVLCKQLEE LLKSGVVGGD GDDGDRDRDC
201: DREGACDGDG DGEAGEGLMV PEMSERLKWS RDVEEINGGG GGGVNQQWNA TTTNPSGGQS SQIWDFNLGQ SRGPEDTSRV EAAYVGKGAA SSFTINNFVD
301: HMNETCSTNV KGVKEIKKDD YKRSTSGQVQ PTKSESNNRP ITFGSEKGSN SSSDLHFTEH IAGTSCKTTR LVATKADLER LAQNRGDAMQ RYKEKRKTRR
401: YDKTIRYESR KARADTRLRV RGRFVKASEA PYP

Arabidopsis Description

COL15Zinc finger protein CONSTANS-LIKE 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7E8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.