Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99873 | Sorghum | nucleus | 75.55 | 74.82 |
| Zm00001d022500_P001 | Maize | nucleus | 26.16 | 59.12 |
| Os07t0667300-01 | Rice | nucleus | 52.81 | 56.84 |
| Zm00001d029149_P001 | Maize | nucleus | 43.77 | 45.09 |
| KRG96381 | Soybean | nucleus | 27.87 | 32.48 |
| KRH68113 | Soybean | nucleus | 27.63 | 32.38 |
| AT2G47890.1 | Thale cress | nucleus | 25.92 | 31.93 |
| Solyc09g074560.2.1 | Tomato | nucleus | 28.61 | 31.37 |
| CDX80141 | Canola | nucleus | 25.18 | 31.02 |
| PGSC0003DMT400029591 | Potato | nucleus | 28.61 | 30.87 |
| CDY53026 | Canola | nucleus | 25.18 | 30.84 |
| Bra004423.1-P | Field mustard | nucleus | 25.18 | 30.84 |
| KRH31920 | Soybean | nucleus | 26.16 | 30.75 |
| HORVU2Hr1G020760.2 | Barley | cytosol, mitochondrion | 29.83 | 30.73 |
| VIT_07s0104g01360.t01 | Wine grape | nucleus | 29.58 | 30.71 |
| KRH71535 | Soybean | nucleus | 24.94 | 30.0 |
| Zm00001d003162_P001 | Maize | nucleus | 18.09 | 23.12 |
| Zm00001d025770_P001 | Maize | nucleus | 17.85 | 22.6 |
| Zm00001d051047_P001 | Maize | nucleus | 16.63 | 21.66 |
| Zm00001d031662_P001 | Maize | nucleus | 25.43 | 21.27 |
| Zm00001d017176_P001 | Maize | nucleus | 17.11 | 20.9 |
| Zm00001d051684_P007 | Maize | nucleus | 20.05 | 20.2 |
| Zm00001d045804_P003 | Maize | nucleus | 20.29 | 19.04 |
| Zm00001d046925_P001 | Maize | nucleus | 15.89 | 17.86 |
| Zm00001d015468_P001 | Maize | mitochondrion | 15.89 | 17.43 |
| Zm00001d024200_P001 | Maize | nucleus | 11.49 | 16.91 |
| Zm00001d049347_P001 | Maize | nucleus | 11.49 | 16.85 |
| Zm00001d017885_P001 | Maize | nucleus | 17.36 | 15.4 |
| Zm00001d045735_P002 | Maize | extracellular, vacuole | 15.89 | 15.19 |
Protein Annotations
| EntrezGene:103647917 | MapMan:15.5.1.2 | UniProt:A0A1D6F3U4 | InterPro:CCT_domain | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008270 |
| InterPro:IPR000315 | InterPro:IPR010402 | ProteinID:ONM26006.1 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 |
| PANTHER:PTHR31717 | PANTHER:PTHR31717:SF10 | SMART:SM00336 | UniParc:UPI0004DEB9B4 | EnsemblPlantsGene:Zm00001d007107 | EnsemblPlants:Zm00001d007107_P001 |
| EnsemblPlants:Zm00001d007107_T001 | InterPro:Znf_B-box | SEG:seg | : | : | : |
Description
Zinc finger protein CONSTANS-LIKE 13
Coordinates
chr2:-:222393488..222401395
Molecular Weight (calculated)
43501.5 Da
IEP (calculated)
4.648
GRAVY (calculated)
-0.417
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDADAAGSK EAPRCDYCMG LPAVVYCRAD SARLCLPCDR HVHGANTVST RHARAPLCAR CRAAAATAVA SPRGGGGGFV CADCYCLEKE DEEKGEEHRD
101: PRPLHHDHDA VEEYAGCPSI AELAAILGVA GYDEKAAAAG GDVGWWSTWE EPQVVCLEDV VVPTTSCHGL HPLLAPPSPK NRSSGGELAD VVIRQLEELA
201: KSEAAAVAAS YAELEPGDGE QLPPWASPEL DIGAAADFGA LDAADADAAW HDAATMAFAA VPSHEEQEAW IATACDVDAR RAEVEVEEAR EQAAPAPDEP
301: CLSSFVDMSE IFPASVTLSS GGDVDNSGNK PDEETAPRPQ LLATTALVPV TEKKGGYDVA HPDRGTVISR YKEKRKNRRF GKQIRYESRK ARADGRMRIK
401: GRFAKSGEV
101: PRPLHHDHDA VEEYAGCPSI AELAAILGVA GYDEKAAAAG GDVGWWSTWE EPQVVCLEDV VVPTTSCHGL HPLLAPPSPK NRSSGGELAD VVIRQLEELA
201: KSEAAAVAAS YAELEPGDGE QLPPWASPEL DIGAAADFGA LDAADADAAW HDAATMAFAA VPSHEEQEAW IATACDVDAR RAEVEVEEAR EQAAPAPDEP
301: CLSSFVDMSE IFPASVTLSS GGDVDNSGNK PDEETAPRPQ LLATTALVPV TEKKGGYDVA HPDRGTVISR YKEKRKNRRF GKQIRYESRK ARADGRMRIK
401: GRFAKSGEV
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.