Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU84486 | Sorghum | nucleus | 85.52 | 81.79 |
Os02t0178100-01 | Rice | nucleus | 62.73 | 70.69 |
Zm00001d046925_P001 | Maize | nucleus | 59.25 | 60.71 |
TraesCS7B01G400600.1 | Wheat | nucleus | 56.57 | 56.72 |
TraesCS7A01G497200.1 | Wheat | nucleus | 55.5 | 55.65 |
TraesCS7D01G484400.1 | Wheat | nucleus | 55.5 | 55.65 |
Zm00001d003162_P001 | Maize | nucleus | 39.14 | 45.62 |
Zm00001d025770_P001 | Maize | nucleus | 38.34 | 44.27 |
Zm00001d051047_P001 | Maize | nucleus | 37.27 | 44.27 |
Zm00001d017176_P001 | Maize | nucleus | 38.34 | 42.69 |
Zm00001d024200_P001 | Maize | nucleus | 24.66 | 33.09 |
Zm00001d049347_P001 | Maize | nucleus | 24.66 | 32.97 |
Zm00001d045735_P002 | Maize | extracellular, vacuole | 35.92 | 31.31 |
Zm00001d022500_P001 | Maize | nucleus | 9.65 | 19.89 |
Zm00001d051684_P007 | Maize | nucleus | 19.57 | 17.98 |
Zm00001d045804_P003 | Maize | nucleus | 19.3 | 16.51 |
Zm00001d007107_P001 | Maize | nucleus | 17.43 | 15.89 |
Zm00001d029149_P001 | Maize | nucleus | 16.62 | 15.62 |
Zm00001d031662_P001 | Maize | nucleus | 19.03 | 14.52 |
Zm00001d017885_P001 | Maize | nucleus | 16.62 | 13.45 |
Protein Annotations
EntrezGene:103626702 | MapMan:35.1 | UniProt:A0A1D6H2A1 | ProteinID:AQK68988.1 | InterPro:CCT_domain | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0008270 | InterPro:IPR000315 | InterPro:IPR010402 | PFAM:PF00643 | PFAM:PF06203 | PFscan:PS50119 |
PFscan:PS51017 | PANTHER:PTHR31319 | PANTHER:PTHR31319:SF36 | SMART:SM00336 | UniParc:UPI000220DA93 | EnsemblPlantsGene:Zm00001d015468 |
EnsemblPlants:Zm00001d015468_P001 | EnsemblPlants:Zm00001d015468_T001 | InterPro:Znf_B-box | SEG:seg | : | : |
Description
Zinc finger protein CONSTANS-LIKE 5
Coordinates
chr5:+:91970566..91972678
Molecular Weight (calculated)
38836.4 Da
IEP (calculated)
6.498
GRAVY (calculated)
-0.221
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALVGRYWG LGGRRCGACG GSPAAAHCRT CPGGAYLCGG CDAGHARAGH ERVWVCEVCE CAPAAVTCRA DAAALCAACD ADIHDANPLA RRHERVPVQP
101: IGAAADPAAE KAALLFGLAA EGKDGGDAAK VVVDASKLDL LFADDVVDPF LAQDFARFPH ADSVVPNDGS NCGAAVDFDF GGGVAVAAKQ PSYSSYTAAS
201: LGHSGSSSEV GLVPDVMCGR GGSVTGGVIE LDFAQSKAAY LPYAATPTHS LSSLDVGAVP ERSDGVMAGR LATPTPATAT ESREARLMRY REKRKNRRFE
301: KTIRYASRKA YAESRPRIKG RFAKRADDND ADADLDEAAA PAPPARSQPQ PQPQPSYRYV LDFAAGYGVV PTF
101: IGAAADPAAE KAALLFGLAA EGKDGGDAAK VVVDASKLDL LFADDVVDPF LAQDFARFPH ADSVVPNDGS NCGAAVDFDF GGGVAVAAKQ PSYSSYTAAS
201: LGHSGSSSEV GLVPDVMCGR GGSVTGGVIE LDFAQSKAAY LPYAATPTHS LSSLDVGAVP ERSDGVMAGR LATPTPATAT ESREARLMRY REKRKNRRFE
301: KTIRYASRKA YAESRPRIKG RFAKRADDND ADADLDEAAA PAPPARSQPQ PQPQPSYRYV LDFAAGYGVV PTF
001: MASSSRLCDS CKSTAATLFC RADAAFLCGD CDGKIHTANK LASRHERVWL CEVCEQAPAH VTCKADAAAL CVTCDRDIHS ANPLSRRHER VPITPFYDAV
101: GPAKSASSSV NFVDEDGGDV TASWLLAKEG IEITNLFSDL DYPKIEVTSE ENSSGNDGVV PVQNKLFLNE DYFNFDLSAS KISQQGFNFI NQTVSTRTID
201: VPLVPESGGV TAEMTNTETP AVQLSPAERE ARVLRYREKR KNRKFEKTIR YASRKAYAEM RPRIKGRFAK RTDSRENDGG DVGVYGGFGV VPSF
101: GPAKSASSSV NFVDEDGGDV TASWLLAKEG IEITNLFSDL DYPKIEVTSE ENSSGNDGVV PVQNKLFLNE DYFNFDLSAS KISQQGFNFI NQTVSTRTID
201: VPLVPESGGV TAEMTNTETP AVQLSPAERE ARVLRYREKR KNRKFEKTIR YASRKAYAEM RPRIKGRFAK RTDSRENDGG DVGVYGGFGV VPSF
Arabidopsis Description
COL3Zinc finger protein CONSTANS-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK53]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.