Factsheet for Zm00001d046925_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90145	Sorghum	nucleus	94.51	91.49
Zm00001d015468_P001	Maize	mitochondrion	60.71	59.25
Zm00001d051047_P001	Maize	nucleus	39.01	45.22
Zm00001d003162_P001	Maize	nucleus	38.19	43.44
Zm00001d025770_P001	Maize	nucleus	38.19	43.03
Zm00001d017176_P001	Maize	nucleus	39.56	42.99
Zm00001d024200_P001	Maize	nucleus	24.45	32.01
Zm00001d049347_P001	Maize	nucleus	23.35	30.47
Zm00001d045735_P002	Maize	extracellular, vacuole	34.34	29.21
Zm00001d022500_P001	Maize	nucleus	9.89	19.89
Zm00001d051684_P007	Maize	nucleus	19.51	17.49
Zm00001d045804_P003	Maize	nucleus	19.51	16.28
Zm00001d007107_P001	Maize	nucleus	17.86	15.89
Zm00001d031662_P001	Maize	nucleus	20.6	15.34
Zm00001d029149_P001	Maize	nucleus	16.21	14.86
Zm00001d017885_P001	Maize	nucleus	16.76	13.23

Protein Annotations

MapMan:35.1	ProteinID:AQL05191.1	InterPro:CCT_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008270	InterPro:IPR000315
InterPro:IPR010402	UniProt:K7WBK7	EMBL:KJ727841	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017
PANTHER:PTHR31319	PANTHER:PTHR31319:SF3	SMART:SM00336	UniParc:UPI000189D756	EnsemblPlantsGene:Zm00001d046925	EnsemblPlants:Zm00001d046925_P001
EnsemblPlants:Zm00001d046925_T001	InterPro:Znf_B-box	SEG:seg	:	:	:

Description

C2C2-CO-like-transcription factor 13Zinc finger protein CONSTANS-LIKE 5

Coordinates

chr9:+:111032442..111034142

Molecular Weight (calculated)

38810.4 Da

IEP (calculated)

6.191

GRAVY (calculated)

-0.275

Length

364 amino acids

Sequence
(BLAST)

001: MELHKYWGVG GRRCGSCEGA PAAVHCRTCV GGSFLCTTCD ARPAHARLGH ERVWMCEVCE LAPAAVTCKA DAAVLCAACD SDIHDANPLA RRHARVPVAP
101: IGSEAAAAAV EAMLFGTGEA AASEADEQHA AAEHAHAHAH ALNLNVEAKD MKLDYLFSEL DPYLSVEIPR FQHADSVVPN GAGAAVELDF TCGIGVKHSS
201: YSSYTATSLA HSGSSSEVGV VPEAFGGSGS GGGSFELDFT RPKPQAYMPY TGTPQSHSVP SADVEVVPER GDLAAVRPVP LMGESREARL MRYREKRKNR
301: RFEKTIRYAS RKAYAETRPR IKGRFAKRAD HDGDADADDA EAEAEAAVPM SYVLDFGYGV VPSF

Best Arabidopsis Sequence Match ( AT5G57660.1 )
(BLAST)

001: MGFGLESIKS ISGGWGAAAR SCDACKSVTA AVFCRVDSAF LCIACDTRIH SFTRHERVWV CEVCEQAPAA VTCKADAAAL CVSCDADIHS ANPLASRHER
101: VPVETFFDSA ETAVAKISAS STFGILGSST TVDLTAVPVM ADDLGLCPWL LPNDFNEPAK IEIGTENMKG SSDFMFSDFD RLIDFEFPNS FNHHQNNAGG
201: DSLVPVQTKT EPLPLTNNDH CFDIDFCRSK LSAFTYPSQS VSHSVSTSSI EYGVVPDGNT NNSVNRSTIT SSTTGGDHQA SSMDREARVL RYREKRKNRK
301: FEKTIRYASR KAYAESRPRI KGRFAKRTET ENDDIFLSHV YASAAHAQYG VVPTF

Arabidopsis Description

COL5Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.