Factsheet for Zm00001d003162_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12446	Sorghum	nucleus	95.0	92.4
Zm00001d025770_P001	Maize	nucleus	92.19	91.33
Os04t0497700-01	Rice	nucleus	83.75	80.48
TraesCS2A01G353900.1	Wheat	nucleus	78.12	79.11
TraesCS2B01G372000.1	Wheat	nucleus	77.81	78.06
TraesCS2D01G351900.1	Wheat	nucleus	77.5	77.74
Zm00001d017176_P001	Maize	nucleus	66.25	63.28
Zm00001d051047_P001	Maize	nucleus	61.25	62.42
GSMUA_Achr7P16370_001	Banana	nucleus	50.0	54.79
GSMUA_Achr10P...	Banana	nucleus	53.75	53.92
Zm00001d015468_P001	Maize	mitochondrion	45.62	39.14
Zm00001d046925_P001	Maize	nucleus	43.44	38.19
Zm00001d024200_P001	Maize	nucleus	28.75	33.09
Zm00001d049347_P001	Maize	nucleus	27.81	31.9
Zm00001d045735_P002	Maize	extracellular, vacuole	42.5	31.78
Zm00001d051684_P007	Maize	nucleus	24.38	19.21
Zm00001d022500_P001	Maize	nucleus	10.62	18.78
Zm00001d045804_P003	Maize	nucleus	24.69	18.12
Zm00001d007107_P001	Maize	nucleus	23.12	18.09
Zm00001d029149_P001	Maize	nucleus	22.19	17.88
Zm00001d031662_P001	Maize	nucleus	24.38	15.95
Zm00001d017885_P001	Maize	nucleus	21.25	14.75

Protein Annotations

EntrezGene:103646270	MapMan:15.5.1.2	UniProt:A0A1D6E763	InterPro:CCT_domain	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008270
InterPro:IPR000315	InterPro:IPR010402	ProteinID:ONM16282.1	PFAM:PF00643	PFAM:PF06203	PFscan:PS50119
PFscan:PS51017	PANTHER:PTHR31319	PANTHER:PTHR31319:SF21	SMART:SM00336	UniParc:UPI0002214ECB	EnsemblPlantsGene:Zm00001d003162
EnsemblPlants:Zm00001d003162_P001	EnsemblPlants:Zm00001d003162_T001	InterPro:Znf_B-box	SEG:seg	:	:

Description

C2C2-CO-like-transcription factor 11Zinc finger protein CONSTANS-LIKE 5

Coordinates

chr2:-:34080161..34081769

Molecular Weight (calculated)

34071.6 Da

IEP (calculated)

5.427

GRAVY (calculated)

-0.382

Length

320 amino acids

Sequence
(BLAST)

001: MEGDEKSAGG APAYWGLGAR PCDACGAEAA RLYCRADAAF LCAGCDARAH GAGSRHARVW LCEVCEHAPA AVTCRADAAA LCASCDADIH SANPLARRHE
101: RLHVAPFFGA LADAPKPFAS AAPPKATDDD GSNEDEAASW LLPEPDHGQK EGATTEVFFA DSDPYLDLDF ARSMDEIKTI GVQQSGSPEL DLAGTKLFYS
201: DHSVNHSVSS SEAAVVPDAA SGMAPMVAVV SRGLEREARL MRYREKRKSR RFEKTIRYAS RKAYAETRPR IKGRFAKRTP GAGEDTLEEH EEMYSSAAAA
301: VAALMAPGGA DADYGVVPTY

Best Arabidopsis Sequence Match ( AT5G57660.1 )
(BLAST)

001: MGFGLESIKS ISGGWGAAAR SCDACKSVTA AVFCRVDSAF LCIACDTRIH SFTRHERVWV CEVCEQAPAA VTCKADAAAL CVSCDADIHS ANPLASRHER
101: VPVETFFDSA ETAVAKISAS STFGILGSST TVDLTAVPVM ADDLGLCPWL LPNDFNEPAK IEIGTENMKG SSDFMFSDFD RLIDFEFPNS FNHHQNNAGG
201: DSLVPVQTKT EPLPLTNNDH CFDIDFCRSK LSAFTYPSQS VSHSVSTSSI EYGVVPDGNT NNSVNRSTIT SSTTGGDHQA SSMDREARVL RYREKRKNRK
301: FEKTIRYASR KAYAESRPRI KGRFAKRTET ENDDIFLSHV YASAAHAQYG VVPTF

Arabidopsis Description

COL5Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.