Factsheet for Zm00001d051684_P007

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012821_P003
Zm00001d014423_P002
Zm00001d030110_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48250.1	Zm00001d012821_P003	AT1G32230.1	19548978
AT5G48250.1	Zm00001d014423_P002	AT1G32230.1	19548978
AT5G48250.1	Zm00001d030110_P001	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07342	Sorghum	nucleus	90.89	90.89
Os02t0724000-01	Rice	nucleus	76.6	76.41
Zm00001d017885_P001	Maize	nucleus	83.0	73.1
TraesCS6B01G315400.1	Wheat	nucleus	68.72	71.54
HORVU6Hr1G071950.2	Barley	nucleus	67.24	71.47
TraesCS6A01G286400.3	Wheat	nucleus	67.73	70.51
TraesCS6D01G267100.1	Wheat	nucleus	67.98	70.41
Zm00001d045804_P003	Maize	nucleus	71.67	66.74
GSMUA_Achr7P20150_001	Banana	nucleus	58.87	58.01
GSMUA_Achr10P...	Banana	nucleus	55.66	56.36
AT3G07650.1	Thale cress	nucleus	49.26	53.76
VIT_00s0194g00070.t01	Wine grape	nucleus	53.94	52.9
Bra001264.1-P	Field mustard	nucleus	45.57	52.71
KRG89998	Soybean	nucleus	52.96	52.57
Bra040020.1-P	Field mustard	nucleus	47.29	52.46
CDY35952	Canola	nucleus	47.54	52.3
CDY07979	Canola	nucleus	45.32	52.27
CDY28029	Canola	nucleus	47.78	52.15
KRH17709	Soybean	nucleus	52.46	52.08
VIT_12s0057g01350.t01	Wine grape	nucleus	53.2	52.05
CDY22125	Canola	nucleus	46.8	51.91
GSMUA_Achr5P22460_001	Banana	nucleus	49.75	51.66
KRH72628	Soybean	nucleus	50.99	51.11
KRH16989	Soybean	nucleus	51.48	50.85
AT5G48250.1	Thale cress	nucleus	46.31	50.4
PGSC0003DMT400074143	Potato	nucleus	50.25	50.0
Bra029666.1-P	Field mustard	nucleus	47.54	50.0
CDX85321	Canola	nucleus	44.09	49.86
CDY48743	Canola	nucleus	42.61	49.43
Bra020709.1-P	Field mustard	nucleus	42.36	49.0
CDY05691	Canola	nucleus	41.87	48.99
CDX86318	Canola	nucleus	43.1	48.88
Bra037499.1-P	Field mustard	nucleus	41.13	48.41
CDX74034	Canola	nucleus	45.81	47.69
Solyc05g020020.2.1	Tomato	nucleus	46.8	46.34
PGSC0003DMT400013624	Potato	nucleus	47.04	46.25
PGSC0003DMT400044878	Potato	nucleus	45.32	44.77
Solyc07g045180.2.1	Tomato	nucleus	45.57	44.26
Solyc12g006240.1.1	Tomato	nucleus	29.31	44.24
Zm00001d025770_P001	Maize	nucleus	19.7	24.77
Zm00001d003162_P001	Maize	nucleus	19.21	24.38
Zm00001d051047_P001	Maize	nucleus	18.23	23.57
Zm00001d017176_P001	Maize	nucleus	18.72	22.69
Zm00001d029149_P001	Maize	nucleus	20.2	20.65
Zm00001d022500_P001	Maize	nucleus	9.11	20.44
Zm00001d007107_P001	Maize	nucleus	20.2	20.05
Zm00001d015468_P001	Maize	mitochondrion	17.98	19.57
Zm00001d046925_P001	Maize	nucleus	17.49	19.51
Zm00001d024200_P001	Maize	nucleus	13.05	19.06
Zm00001d049347_P001	Maize	nucleus	13.05	19.0
Zm00001d045735_P002	Maize	extracellular, vacuole	19.7	18.69
Zm00001d031662_P001	Maize	nucleus	21.67	18.0

Protein Annotations

EntrezGene:100193195	MapMan:15.5.1.2	ProteinID:AQK54967.1	ProteinID:AQK54968.1	ProteinID:AQK54969.1	ProteinID:AQK54970.1
UniProt:B4FE60	EMBL:BT035398	InterPro:CCT_domain	EMBL:EU972243	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008270
InterPro:IPR000315	InterPro:IPR010402	EMBL:KJ726843	PFAM:PF00643	PFAM:PF06203	PFscan:PS50119
PFscan:PS51017	PANTHER:PTHR31717	PANTHER:PTHR31717:SF6	SMART:SM00336	UniParc:UPI00017B677C	EnsemblPlantsGene:Zm00001d051684
EnsemblPlants:Zm00001d051684_P007	EnsemblPlants:Zm00001d051684_T007	InterPro:Znf_B-box	SEG:seg	:	:

Description

C2C2-CO-like-transcription factor 9Zinc finger protein CONSTANS-LIKE 9

Coordinates

chr4:+:166653594..166659390

Molecular Weight (calculated)

44512.1 Da

IEP (calculated)

5.190

GRAVY (calculated)

-0.520

Length

406 amino acids

Sequence
(BLAST)

001: MVPLCGFCGK QRSMIYCRSD AASLCLSCDR SVHSANALSR RHRRTLLCDR CGLQPASVRC LEDNTSLCQN CDWNGHDAAS GASGHKRQAI NCYSGCPSSA
101: ELSRIWSFII DIPTVAAEPN CEDGLSMMTI DDSDVTNHHG ASDDKRLLEI ANTALMSDPP SPDKLKPLIG SSSGDGFDVL PLATDQPAGP VSATPKVPYA
201: RDDNKFNDGM YEDLCVDDAD LTFENYEELF GTSHIRIEEL FDDAGIDSYF EMKETPPFDF NEQPKIVQLQ CSDVVPADCA MSNTGERADS SLCIPVRQVR
301: SSISHPLSGL TGESSAGDHQ DCGVSPILLM GEPPWYSPGP EGSLAGGSRD SALTRYKEKK KKRMFDKKIR YASRKARADV RKRVKGRFIK AGEAYDYDPL
401: SQTRSY

Best Arabidopsis Sequence Match ( AT3G07650.1 )
(BLAST)

001: MGYMCDFCGE QRSMVYCRSD AACLCLSCDR SVHSANALSK RHSRTLVCER CNAQPATVRC VEERVSLCQN CDWSGHNNSN NNNSSSSSTS PQQHKRQTIS
101: CYSGCPSSSE LASIWSFCLD LAGQSICEQE LGMMNIDDDG PTDKKTCNED KKDVLVGSSS IPETSSVPQG KSSSAKDVGM CEDDFYGNLG MDEVDMALEN
201: YEELFGTAFN PSEELFGHGG IDSLFHKHQT APEGGNSVQP AGSNDSFMSS KTEPIICFAS KPAHSNISFS GVTGESSAGD FQECGASSSI QLSGEPPWYP
301: PTLQDNNACS HSVTRNNAVM RYKEKKKARK FDKRVRYASR KARADVRRRV KGRFVKAGEA YDYDPLTPTR SY

Arabidopsis Description

COL9AT3G07650 protein [Source:UniProtKB/TrEMBL;Acc:A1A6H1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.