Factsheet for Zm00001d017176_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05406	Sorghum	nucleus	89.55	89.29
Zm00001d051047_P001	Maize	nucleus	77.01	82.17
Os02t0610500-01	Rice	nucleus	72.54	73.19
HORVU6Hr1G056000.2	Barley	nucleus	68.66	72.33
TraesCS6D01G202000.1	Wheat	nucleus	67.76	71.61
TraesCS6B01G248400.1	Wheat	nucleus	67.46	70.41
TraesCS6A01G218900.1	Wheat	nucleus	67.16	70.09
Zm00001d025770_P001	Maize	nucleus	64.18	66.56
Zm00001d003162_P001	Maize	nucleus	63.28	66.25
GSMUA_Achr7P16370_001	Banana	nucleus	45.97	52.74
GSMUA_Achr10P...	Banana	nucleus	47.76	50.16
Zm00001d046925_P001	Maize	nucleus	42.99	39.56
Zm00001d015468_P001	Maize	mitochondrion	42.69	38.34
Zm00001d024200_P001	Maize	nucleus	28.36	34.17
Zm00001d049347_P001	Maize	nucleus	28.36	34.05
Zm00001d045735_P002	Maize	extracellular, vacuole	39.4	30.84
Zm00001d022500_P001	Maize	nucleus	10.45	19.34
Zm00001d051684_P007	Maize	nucleus	22.69	18.72
Zm00001d045804_P003	Maize	nucleus	22.69	17.43
Zm00001d029149_P001	Maize	nucleus	20.6	17.38
Zm00001d007107_P001	Maize	nucleus	20.9	17.11
Zm00001d017885_P001	Maize	nucleus	20.6	14.97
Zm00001d031662_P001	Maize	nucleus	21.19	14.52

Protein Annotations

EntrezGene:100281289	MapMan:15.5.1.2	UniProt:A0A1D6HCU0	ProteinID:AQK72516.1	InterPro:CCT_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0008270	InterPro:IPR000315	InterPro:IPR010402	PFAM:PF00643	PFAM:PF06203	PFscan:PS50119
PFscan:PS51017	PANTHER:PTHR31319	PANTHER:PTHR31319:SF21	SMART:SM00336	UniParc:UPI000221BDAF	EnsemblPlantsGene:Zm00001d017176
EnsemblPlants:Zm00001d017176_P001	EnsemblPlants:Zm00001d017176_T001	InterPro:Znf_B-box	SEG:seg	:	:

Description

C2C2-CO-like-transcription factor 3CONSTANS-like protein CO5

Coordinates

chr5:+:188032923..188034708

Molecular Weight (calculated)

35393.2 Da

IEP (calculated)

4.813

GRAVY (calculated)

-0.241

Length

335 amino acids

Sequence
(BLAST)

001: MDTAAELELG LELEQKPAAG YWSVVGARPC DACAAEPARL HCRADGAFLC PGCDARAHGA GSRHARVWLC EVCEHAPAAV TCRADAAALC AACDADIHSA
101: NPLARRHERL PVAPLFGALA DAPQPFPSPA FAAAAGAEAP AQGEAVAEDY GSSEAEAASW LLPEPDNSHE DSAADTFFAE SDAYLGADLD FARCMDGVKA
201: IGVPVAPPEL DIGAGSFCYP EHSMNHILSS SSEVAVVPDA QAAGLPVVVV VSRGEEREAR LMRYREKRKN RRFDKTIRYA SRKAYAETRP RIKGRFAKRR
301: SAEGEDEALE HEEGACFSPT GSAPAASDGV VPSFC

Best Arabidopsis Sequence Match ( AT5G57660.1 )
(BLAST)

001: MGFGLESIKS ISGGWGAAAR SCDACKSVTA AVFCRVDSAF LCIACDTRIH SFTRHERVWV CEVCEQAPAA VTCKADAAAL CVSCDADIHS ANPLASRHER
101: VPVETFFDSA ETAVAKISAS STFGILGSST TVDLTAVPVM ADDLGLCPWL LPNDFNEPAK IEIGTENMKG SSDFMFSDFD RLIDFEFPNS FNHHQNNAGG
201: DSLVPVQTKT EPLPLTNNDH CFDIDFCRSK LSAFTYPSQS VSHSVSTSSI EYGVVPDGNT NNSVNRSTIT SSTTGGDHQA SSMDREARVL RYREKRKNRK
301: FEKTIRYASR KAYAESRPRI KGRFAKRTET ENDDIFLSHV YASAAHAQYG VVPTF

Arabidopsis Description

COL5Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.