Factsheet for Zm00001d031662_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d028432_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G28050.1	Zm00001d028432_P001	AT3G48590.1	17138697
AT1G28050.1	Zm00001d028432_P001	AT5G63470.1	17138697
AT2G33500.1	Zm00001d002027_P002	AT1G71230.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14176	Sorghum	nucleus	87.12	86.94
TraesCS7D01G264300.1	Wheat	nucleus	71.17	71.17
TraesCS7B01G161500.1	Wheat	nucleus	70.96	71.11
TraesCS7A01G263500.1	Wheat	nucleus	70.55	70.41
Os08t0536300-01	Rice	nucleus	69.73	69.88
HORVU0Hr1G021050.5	Barley	cytosol	52.97	61.23
GSMUA_Achr6P06130_001	Banana	nucleus	38.45	42.25
CDY15696	Canola	nucleus	23.31	39.45
Bra030070.1-P	Field mustard	nucleus	23.31	37.01
CDY30385	Canola	nucleus	29.04	36.69
CDY68819	Canola	nucleus	29.04	36.69
CDY11755	Canola	nucleus	29.45	36.64
CDY66639	Canola	nucleus	29.24	35.48
Bra041077.1-P	Field mustard	nucleus	29.04	34.8
VIT_01s0146g00360.t01	Wine grape	nucleus	33.13	34.54
Bra010908.1-P	Field mustard	nucleus	29.24	34.21
VIT_14s0068g01380.t01	Wine grape	nucleus	30.88	33.63
CDX90119	Canola	nucleus	28.63	33.41
AT2G33500.1	Thale cress	nucleus	27.2	33.08
AT1G28050.1	Thale cress	nucleus	29.24	33.03
Solyc05g024010.2.1	Tomato	nucleus	30.27	32.74
PGSC0003DMT400065377	Potato	nucleus	30.27	32.67
KRH06865	Soybean	nucleus	25.36	32.55
KRG94656	Soybean	nucleus	24.74	31.43
CDY48428	Canola	nucleus	17.18	31.11
Zm00001d007107_P001	Maize	nucleus	21.27	25.43
Zm00001d029149_P001	Maize	nucleus	20.04	24.69
Zm00001d003162_P001	Maize	nucleus	15.95	24.38
Zm00001d025770_P001	Maize	nucleus	15.75	23.84
Zm00001d051047_P001	Maize	nucleus	14.52	22.61
Zm00001d045804_P003	Maize	nucleus	19.84	22.25
Zm00001d051684_P007	Maize	nucleus	18.0	21.67
Zm00001d017176_P001	Maize	nucleus	14.52	21.19
Zm00001d046925_P001	Maize	nucleus	15.34	20.6
Zm00001d015468_P001	Maize	mitochondrion	14.52	19.03
Zm00001d022500_P001	Maize	nucleus	6.75	18.23
Zm00001d045735_P002	Maize	extracellular, vacuole	15.34	17.52
Zm00001d017885_P001	Maize	nucleus	15.34	16.27
Zm00001d024200_P001	Maize	nucleus	9.2	16.19
Zm00001d049347_P001	Maize	nucleus	8.18	14.34

Protein Annotations

MapMan:15.5.1.2	UniProt:A0A1D6KKF2	InterPro:CCT_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008270	InterPro:IPR000315
InterPro:IPR010402	ProteinID:ONM03397.1	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017	PANTHER:PTHR31717
PANTHER:PTHR31717:SF20	SMART:SM00336	UniParc:UPI0008450C25	EnsemblPlantsGene:Zm00001d031662	EnsemblPlants:Zm00001d031662_P001	EnsemblPlants:Zm00001d031662_T001
InterPro:Znf_B-box	SEG:seg	:	:	:	:

Description

Zinc finger protein CONSTANS-LIKE 15

Coordinates

chr1:-:197918030..197921539

Molecular Weight (calculated)

51382.9 Da

IEP (calculated)

6.270

GRAVY (calculated)

-0.396

Length

489 amino acids

Sequence
(BLAST)

001: MKSCGGGGAD GQQCPCDYCG EAAAALHCRA DAARLCVACD RHVHAANALS RKHVRAPLCA GCAARPAAAR VSLGADPAFL CADCCEGCAA ASAARVSVEG
101: FSGCPSAAEL AASWGLDLRR AAVAVGDDGD GGDDDDPFLS VLDYSVLGVG VADTDLRDLY VPCDPPRVPV PDAGARPLRG EALCDQLAEM ARRDEADTSH
201: AHPHSDLSPR TPRRTSAASS GRLPSGKMAP PAALPVPAHP PPAAPQEVPL PYTSLLMMAS ANCSDLIGGG DRVGDTDEQL LWDCAAPSVP PTQIWDFNLG
301: RSRHHDEKSA LEVGYGSNHG GFMIKSYSDM LKDISSGTTK DLEDIYDSRY CSTAEDIMSS NICQLSSKNV STGSNKRKVR SCAASTMDGP TTSGNHNHVP
401: ASASGPGAAL TREISFGDQT VSAPAAETER PAAVRIDSET LAQNRDSAMQ RYEKHIRYES RKLRADTRKR VKGRFVKSTE ALNAARYNG

Best Arabidopsis Sequence Match ( AT1G28050.1 )
(BLAST)

001: MSSSERVPCD FCGERTAVLF CRADTAKLCL PCDQQVHTAN LLSRKHVRSQ ICDNCGNEPV SVRCFTDNLI LCQECDWDVH GSCSVSDAHV RSAVEGFSGC
101: PSALELAALW GLDLEQGRKD EENQVPMMAM MMDNFGMQLD SWVLGSNELI VPSDTTFKKR GSCGSSCGRY KQVLCKQLEE LLKSGVVGGD GDDGDRDRDC
201: DREGACDGDG DGEAGEGLMV PEMSERLKWS RDVEEINGGG GGGVNQQWNA TTTNPSGGQS SQIWDFNLGQ SRGPEDTSRV EAAYVGKGAA SSFTINNFVD
301: HMNETCSTNV KGVKEIKKDD YKRSTSGQVQ PTKSESNNRP ITFGSEKGSN SSSDLHFTEH IAGTSCKTTR LVATKADLER LAQNRGDAMQ RYKEKRKTRR
401: YDKTIRYESR KARADTRLRV RGRFVKASEA PYP

Arabidopsis Description

COL15Zinc finger protein CONSTANS-LIKE 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7E8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.