Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94656 | Soybean | nucleus | 89.5 | 88.57 |
| CDY15696 | Canola | nucleus | 30.18 | 39.79 |
| VIT_14s0068g01380.t01 | Wine grape | nucleus | 44.09 | 37.42 |
| Bra030070.1-P | Field mustard | nucleus | 30.18 | 37.34 |
| AT2G33500.1 | Thale cress | nucleus | 34.65 | 32.84 |
| CDY11755 | Canola | nucleus | 33.6 | 32.57 |
| CDY30385 | Canola | nucleus | 33.07 | 32.56 |
| CDY68819 | Canola | nucleus | 33.07 | 32.56 |
| Solyc05g024010.2.1 | Tomato | nucleus | 38.58 | 32.52 |
| CDY66639 | Canola | nucleus | 34.12 | 32.26 |
| PGSC0003DMT400065377 | Potato | nucleus | 38.32 | 32.23 |
| Bra010908.1-P | Field mustard | nucleus | 34.38 | 31.34 |
| CDX90119 | Canola | nucleus | 34.12 | 31.03 |
| Bra041077.1-P | Field mustard | nucleus | 32.81 | 30.64 |
| AT1G28050.1 | Thale cress | nucleus | 34.38 | 30.25 |
| KRH31920 | Soybean | nucleus | 26.51 | 29.02 |
| KRH71535 | Soybean | nucleus | 25.72 | 28.82 |
| KRG96381 | Soybean | nucleus | 25.98 | 28.21 |
| KRH68113 | Soybean | nucleus | 25.72 | 28.08 |
| GSMUA_Achr6P06130_001 | Banana | nucleus | 31.76 | 27.19 |
| GSMUA_Achr10P... | Banana | nucleus | 32.55 | 27.07 |
| CDY48428 | Canola | nucleus | 18.9 | 26.67 |
| EES14176 | Sorghum | nucleus | 34.12 | 26.53 |
| Os09t0509700-01 | Rice | nucleus | 29.92 | 26.45 |
| Zm00001d031662_P001 | Maize | nucleus | 32.55 | 25.36 |
| TraesCS7B01G161500.1 | Wheat | nucleus | 32.28 | 25.2 |
| TraesCS7D01G264300.1 | Wheat | nucleus | 32.02 | 24.95 |
| GSMUA_Achr11P... | Banana | nucleus | 33.86 | 24.9 |
| TraesCS7A01G263500.1 | Wheat | nucleus | 31.76 | 24.69 |
| KRH52295 | Soybean | nucleus, plastid | 18.37 | 22.58 |
| KRH61628 | Soybean | nucleus, plastid | 18.11 | 22.33 |
| KRH18308 | Soybean | nucleus | 19.95 | 21.05 |
| KRH26833 | Soybean | nucleus | 23.36 | 21.04 |
| KRH22524 | Soybean | nucleus | 23.1 | 20.8 |
| KRG93763 | Soybean | nucleus | 19.95 | 20.77 |
| KRH72628 | Soybean | nucleus | 21.78 | 20.49 |
| KRH45169 | Soybean | nucleus | 18.64 | 20.4 |
| KRH16989 | Soybean | nucleus | 21.78 | 20.19 |
| KRG89998 | Soybean | nucleus | 21.52 | 20.05 |
| KRH17709 | Soybean | nucleus | 21.52 | 20.05 |
| KRH18980 | Soybean | nucleus | 19.16 | 20.0 |
| KRH01455 | Soybean | nucleus | 18.37 | 19.89 |
| KRH02915 | Soybean | nucleus | 19.42 | 19.79 |
| HORVU0Hr1G021050.5 | Barley | cytosol | 21.78 | 19.62 |
| KRG90917 | Soybean | nucleus | 16.27 | 14.16 |
| KRH35868 | Soybean | nucleus | 15.49 | 13.47 |
Protein Annotations
| EntrezGene:100801439 | MapMan:15.5.1.2 | EMBL:ACUP02009893 | InterPro:CCT_domain | EnsemblPlantsGene:GLYMA_16G050900 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008270 | EMBL:HM068897 | UniProt:I1MLC5 | InterPro:IPR000315 | InterPro:IPR010402 | EnsemblPlants:KRH06865 |
| ProteinID:KRH06865 | ProteinID:KRH06865.1 | PFAM:PF00643 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 |
| PANTHER:PTHR31717 | PANTHER:PTHR31717:SF20 | SMART:SM00336 | UniParc:UPI000233E080 | InterPro:Znf_B-box | SEG:seg |
Description
hypothetical protein
Coordinates
chr16:+:4874634..4878624
Molecular Weight (calculated)
42879.4 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.659
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPCDYCHSK PAILFCRPDS AKLCLLCDQH VHAANALSLK HVRFQICDSC KTDTAVLRCS TDNLVLCHHC DVETHGAAAS SHHQRHRLHG LSGCPSVTEI
101: VSALCLDFRA QDPVVPTAAS GGRDEVYEQV LEIARQRNDD LGAEQLKFDE SPINDVVVVD EMLMQQTPFT SLLMLPNSES EFDSRKSNDN NGYGTEAGDL
201: LWNYNPAYQP PQVWDFQLQK SRDCHEPRVV TFDGLEVPKL FQDEHNMKYS TIGDDIDILS RNNQSDQSSS SHAKKKEENN KKAKGGLSSE SKLFESIPYN
301: GTNNVVVMEH LVGGNENVGT LTARVSLEEL AKNRGDAMLR YKEKKKTRRY DKHIRYESRK ARADTRKRVR GRFVKASDVQ A
101: VSALCLDFRA QDPVVPTAAS GGRDEVYEQV LEIARQRNDD LGAEQLKFDE SPINDVVVVD EMLMQQTPFT SLLMLPNSES EFDSRKSNDN NGYGTEAGDL
201: LWNYNPAYQP PQVWDFQLQK SRDCHEPRVV TFDGLEVPKL FQDEHNMKYS TIGDDIDILS RNNQSDQSSS SHAKKKEENN KKAKGGLSSE SKLFESIPYN
301: GTNNVVVMEH LVGGNENVGT LTARVSLEEL AKNRGDAMLR YKEKKKTRRY DKHIRYESRK ARADTRKRVR GRFVKASDVQ A
001: MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQQ EDSVHSTSTK
301: GQETSKSNNI PAAIHSHKSS NDSCGLHCTE HIAITSNRAT RLVAVTNADL EQMAQNRDNA MQRYKEKKKT RRYDKTIRYE TRKARAETRL RVKGRFVKAT
401: DP
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQQ EDSVHSTSTK
301: GQETSKSNNI PAAIHSHKSS NDSCGLHCTE HIAITSNRAT RLVAVTNADL EQMAQNRDNA MQRYKEKKKT RRYDKTIRYE TRKARAETRL RVKGRFVKAT
401: DP
Arabidopsis Description
COL14Zinc finger protein CONSTANS-LIKE 14 [Source:UniProtKB/Swiss-Prot;Acc:O22800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.