Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71535 | Soybean | nucleus | 87.64 | 89.71 |
| KRH68113 | Soybean | nucleus | 58.05 | 57.88 |
| KRG96381 | Soybean | nucleus | 58.05 | 57.55 |
| CDY53026 | Canola | nucleus | 41.67 | 43.41 |
| CDX80141 | Canola | nucleus | 41.38 | 43.37 |
| Bra004423.1-P | Field mustard | nucleus | 41.38 | 43.11 |
| VIT_07s0104g01360.t01 | Wine grape | nucleus | 48.28 | 42.64 |
| Solyc09g074560.2.1 | Tomato | nucleus | 45.69 | 42.63 |
| PGSC0003DMT400029591 | Potato | nucleus | 45.69 | 41.95 |
| AT2G47890.1 | Thale cress | nucleus | 38.79 | 40.66 |
| GSMUA_Achr6P13590_001 | Banana | cytosol, mitochondrion, nucleus | 8.62 | 33.71 |
| GSMUA_Achr3P08880_001 | Banana | nucleus | 33.91 | 28.92 |
| TraesCS2D01G121400.1 | Wheat | nucleus | 31.03 | 28.35 |
| EER94860 | Sorghum | nucleus | 33.62 | 28.33 |
| Zm00001d029149_P001 | Maize | nucleus | 32.18 | 28.21 |
| TraesCS2B01G140300.1 | Wheat | nucleus | 31.32 | 28.17 |
| Os07t0667300-01 | Rice | nucleus | 30.75 | 28.16 |
| TraesCS2A01G119600.1 | Wheat | nucleus | 30.75 | 28.01 |
| TraesCS4D01G167300.1 | Wheat | nucleus | 31.32 | 27.46 |
| Os03t0351100-01 | Rice | nucleus | 31.61 | 27.3 |
| TraesCS4B01G155800.1 | Wheat | nucleus | 30.75 | 26.95 |
| TraesCS4A01G140600.1 | Wheat | nucleus | 31.61 | 26.7 |
| KRH06865 | Soybean | nucleus | 29.02 | 26.51 |
| EER99873 | Sorghum | nucleus | 31.32 | 26.39 |
| Zm00001d007107_P001 | Maize | nucleus | 30.75 | 26.16 |
| Zm00001d022500_P001 | Maize | nucleus | 13.51 | 25.97 |
| KRG94656 | Soybean | nucleus | 28.16 | 25.45 |
| HORVU4Hr1G048700.1 | Barley | nucleus, plastid | 31.61 | 23.61 |
| KRH61628 | Soybean | nucleus, plastid | 20.69 | 23.3 |
| KRH52295 | Soybean | nucleus, plastid | 20.69 | 23.23 |
| KRG89998 | Soybean | nucleus | 26.44 | 22.49 |
| KRH18980 | Soybean | nucleus | 22.99 | 21.92 |
| KRH17709 | Soybean | nucleus | 25.57 | 21.76 |
| KRH72628 | Soybean | nucleus | 25.29 | 21.73 |
| KRH16989 | Soybean | nucleus | 24.71 | 20.92 |
| KRH02915 | Soybean | nucleus | 22.41 | 20.86 |
| KRG93763 | Soybean | nucleus | 21.84 | 20.77 |
| KRH45169 | Soybean | nucleus | 20.69 | 20.69 |
| KRH18308 | Soybean | nucleus | 20.98 | 20.22 |
| KRH26833 | Soybean | nucleus | 23.56 | 19.39 |
| KRH01455 | Soybean | nucleus | 19.54 | 19.32 |
| KRH22524 | Soybean | nucleus | 22.41 | 18.44 |
| HORVU2Hr1G020760.2 | Barley | cytosol, mitochondrion | 17.82 | 15.62 |
| KRG90917 | Soybean | nucleus | 17.53 | 13.93 |
| KRH35868 | Soybean | nucleus | 16.95 | 13.47 |
Protein Annotations
| EntrezGene:100798117 | MapMan:15.5.1.2 | EMBL:ACUP02006091 | InterPro:CCT_domain | EnsemblPlantsGene:GLYMA_10G021400 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008270 | InterPro:IPR000315 | InterPro:IPR010402 | UniProt:K7LGY4 | EnsemblPlants:KRH31920 | ProteinID:KRH31920 |
| ProteinID:KRH31920.1 | PFAM:PF00643 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 | PANTHER:PTHR31717 |
| PANTHER:PTHR31717:SF16 | SMART:SM00336 | UniParc:UPI0001BA46ED | InterPro:Znf_B-box | : | : |
Description
hypothetical protein
Coordinates
chr10:+:1857313..1860298
Molecular Weight (calculated)
38836.2 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.698
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSGSPSPNS KQRTCDYCGD FTALLYCSAD SAKLCFFCDR KVHSPNQLFS KHTRAQLCDS CGDSPASVLC SAENSVLCHN CDCEKHKHLA SEVHQRKPLE
101: GFSGCPSVTE LLTILGLSEK SLLSNEGTSQ IDYDLSDLHV WSAPSVNGLE YLITSTASSH KNRKSAFGRH KEEILSQLRE LIKLEPDLIH GEVDAERQGQ
201: FGNLPTGFER DVEASMFPSY EAGVFCWHGE SSDPTNQIVP SDTSSLRDFG EVVSAEDGSF TIPGTGTQAN FNNEGKPSNS FNSENLSPTP KATPYELTSH
301: ERDSALLRYR EKKKTRRYDK HIRYESRKVR AESRMRIKGR FVKDETQK
101: GFSGCPSVTE LLTILGLSEK SLLSNEGTSQ IDYDLSDLHV WSAPSVNGLE YLITSTASSH KNRKSAFGRH KEEILSQLRE LIKLEPDLIH GEVDAERQGQ
201: FGNLPTGFER DVEASMFPSY EAGVFCWHGE SSDPTNQIVP SDTSSLRDFG EVVSAEDGSF TIPGTGTQAN FNNEGKPSNS FNSENLSPTP KATPYELTSH
301: ERDSALLRYR EKKKTRRYDK HIRYESRKVR AESRMRIKGR FVKDETQK
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.