Factsheet for Os07t0667300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99873	Sorghum	nucleus	58.95	54.24
Zm00001d007107_P001	Maize	nucleus	56.84	52.81
Os03t0351100-01	Rice	nucleus	52.37	49.38
GSMUA_Achr6P13590_001	Banana	cytosol, mitochondrion, nucleus	9.21	39.33
Os06t0654900-01	Rice	nucleus	7.63	35.8
HORVU2Hr1G020760.2	Barley	cytosol, mitochondrion	33.95	32.49
KRG96381	Soybean	nucleus	30.0	32.48
KRH68113	Soybean	nucleus	29.74	32.38
AT2G47890.1	Thale cress	nucleus	28.16	32.23
Solyc09g074560.2.1	Tomato	nucleus	31.05	31.64
VIT_07s0104g01360.t01	Wine grape	nucleus	32.63	31.47
CDY53026	Canola	nucleus	27.37	31.14
CDX80141	Canola	nucleus	27.11	31.02
Bra004423.1-P	Field mustard	nucleus	27.11	30.84
KRH31920	Soybean	nucleus	28.16	30.75
PGSC0003DMT400029591	Potato	nucleus	30.53	30.61
KRH71535	Soybean	nucleus	26.84	30.0
Os02t0610500-01	Rice	nucleus	22.11	25.3
Os04t0497700-01	Rice	nucleus	21.05	24.02
Os09t0509700-01	Rice	nucleus	26.58	23.43
Os08t0536300-01	Rice	nucleus	29.47	22.95
Os06t0298200-01	Rice	nucleus	23.42	21.81
Os02t0724000-01	Rice	nucleus	21.58	20.15
Os02t0178100-01	Rice	nucleus	16.58	19.03
Os06t0275000-01	Rice	mitochondrion	18.95	18.23
Os09t0240200-01	Rice	nucleus	14.47	16.42
Os08t0249000-01	Rice	nucleus	3.68	7.78

Protein Annotations

MapMan:15.5.1.2	EntrezGene:4344220	EMBL:AK120101	ProteinID:BAF22488.1	ProteinID:BAT03112.1	InterPro:CCT_domain
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008270	InterPro:IPR000315	InterPro:IPR010402	EnsemblPlantsGene:Os07g0667300	EnsemblPlants:Os07t0667300-01
PFAM:PF06203	PFscan:PS50119	PFscan:PS51017	PANTHER:PTHR31717	PANTHER:PTHR31717:SF10	UniProt:Q0D3T5
SMART:SM00336	UniParc:UPI0000E12C66	RefSeq:XP_015645435.1	InterPro:Znf_B-box	SEG:seg	:

Description

B-box-containing protein 23, CCT domain-containing gene 27, "CCT (CO, CO-LIKE and TOC1) domain protein 27", CCT domain protein 27CONSTANS-like transcriptional activator, Negative regulation of flowering (Os07t0667300-01)

Coordinates

chr7:-:28184879..28187843

Molecular Weight (calculated)

40359.9 Da

IEP (calculated)

4.829

GRAVY (calculated)

-0.407

Length

380 amino acids

Sequence
(BLAST)

001: MARDDDPAKK LAVDGGVAAA ARCCDFCGGL PAVVYCRADS ARLCLPCDRH VHAANTVSTR HARAPLCSAC RAAPAAAFHR GDGFLCSSCD FDERLRRGSI
101: GGGGDELPLD DRAAVEGYTG CPSIGELAAI LGVVGGDSDK PADDGWWSAS WEEEAPQVLS LDDIIVPTTS CHGLRPLLTP PSPENQSSPD NGELDGEVVR
201: QLGELARSEA AAQATFVAGD QLASWASPEF TSGHGDFGIE AASTTVPSCE NETWIMSTDC TDPTDASKTD IAREEAPASS SAEPCLSSLV EISEICRSMS
301: YSGSGIDNGG HDPSTLAIMP TQALPKKGVY DIAYPDRGTV ISRYKEKRKN RRFDKQIRYE SRKARADGRL RIKGRFAKSN

Best Arabidopsis Sequence Match ( AT2G47890.1 )
(BLAST)

001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP

Arabidopsis Description

COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.