Factsheet for Os09t0509700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0251350-00
Os04t0654700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G28050.1	Os03t0251350-00	AT3G48590.1	17138697
AT1G28050.1	Os03t0251350-00	AT5G63470.1	17138697
AT2G33500.1	Os04t0654700-02	AT1G71230.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0536300-01	Rice	nucleus	59.86	52.87
CDY15696	Canola	nucleus	26.22	39.1
Bra030070.1-P	Field mustard	nucleus	26.45	37.01
CDY30385	Canola	nucleus	29.93	33.33
Os06t0654900-01	Rice	nucleus	6.26	33.33
CDY68819	Canola	nucleus	29.93	33.33
CDY11755	Canola	nucleus	30.39	33.33
CDY66639	Canola	nucleus	31.09	33.25
Bra041077.1-P	Field mustard	nucleus	30.16	31.86
AT2G33500.1	Thale cress	nucleus	29.23	31.34
Bra010908.1-P	Field mustard	nucleus	30.39	31.34
CDX90119	Canola	nucleus	29.93	30.79
KRG94656	Soybean	nucleus	27.15	30.39
AT1G28050.1	Thale cress	nucleus	30.16	30.02
KRH06865	Soybean	nucleus	26.45	29.92
VIT_01s0146g00360.t01	Wine grape	nucleus	31.55	29.0
VIT_14s0068g01380.t01	Wine grape	nucleus	29.93	28.73
Solyc05g024010.2.1	Tomato	nucleus	29.93	28.54
PGSC0003DMT400065377	Potato	nucleus	29.93	28.48
CDY48428	Canola	nucleus	17.63	28.15
Os07t0667300-01	Rice	nucleus	23.43	26.58
Os03t0351100-01	Rice	nucleus	23.9	25.56
Os04t0497700-01	Rice	nucleus	19.26	24.92
Os02t0610500-01	Rice	nucleus	19.03	24.7
Os02t0724000-01	Rice	nucleus	22.04	23.34
Os06t0298200-01	Rice	nucleus	21.81	23.04
Os02t0178100-01	Rice	nucleus	17.4	22.66
Os06t0275000-01	Rice	mitochondrion	17.4	18.99
Os09t0240200-01	Rice	nucleus	14.62	18.81
Os08t0249000-01	Rice	nucleus	4.18	10.0

Protein Annotations

MapMan:15.5.1.2	UniProt:A0A0P0XQF3	ProteinID:BAT08900.1	InterPro:CCT_domain	GO:GO:0003674	GO:GO:0003824
GO:GO:0003964	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006278	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	InterPro:IPR000315	InterPro:IPR010402
EnsemblPlantsGene:Os09g0509700	EnsemblPlants:Os09t0509700-01	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017	PANTHER:PTHR31717
PANTHER:PTHR31717:SF20	SMART:SM00336	UniParc:UPI0003939433	InterPro:Znf_B-box	SEG:seg	:

Description

B-box-containing protein 28, CCT domain-containing gene 32, CCT (CO, CO-LIKE and TOC1) domain protein 32, CCT domain protein 32Zinc finger, B-box domain containing protein. (Os09t0509700-01)

Coordinates

chr9:-:19783524..19786772

Molecular Weight (calculated)

46380.0 Da

IEP (calculated)

7.432

GRAVY (calculated)

-0.588

Length

431 amino acids

Sequence
(BLAST)

001: MTWRSCDYCG EAAAALHCRA DAARLCVACD RHVHGANALS RRHVRAPLCA RCEARPAAAR VAAVAGAGGC GGGGEARFLC AGCADDDGAE AARVPVVGFS
101: GCPGAAELAA SWGLDLGGGG GRDEFEEDPF FPEAGYPMLA ADRVLRDMYV PCDPPPEVAA GGRGRRLKGD SLCHQLAELA RREMESAPAQ ANSGSISPSA
201: RRGSAAAIRH EAAAAAAAQR ATLPYKSTPV TEAAGCGDVG NGEQFTDDNE LVWQRTAPSD PPCQIWDFNL GKSRDHDEHS ALELHFGPKD GGFMIKSYND
301: MIEEVSSSSR KDLQYIYDST YSFATEDIVS ANIYQLTPKQ LSTATSGNRR HKNEQHGLTN DGPSSSRIDS KTIAMNRDNA MQRYREKRKT RRYDKHIRYE
401: SRKMRADTRT RVKGRFVRAT DIFNVGGGDG G

Best Arabidopsis Sequence Match ( AT2G33500.2 )
(BLAST)

001: MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF
101: SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG
201: SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQE DSVHSTSTKG
301: QETSKSNNIP AAIHSHKSSN DSCGLHCTEH IAITSNRATR LVAVTNADLE QMAQNRDNAM QRYKEKKKTR RYDKTIRYET RKARAETRLR VKGRFVKATD
401: P

Arabidopsis Description

COL14Zinc finger protein CONSTANS-LIKE 14 [Source:UniProtKB/Swiss-Prot;Acc:O22800]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.