Factsheet for Os02t0178100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0654900-01	Rice	nucleus	18.13	74.07
OQU84486	Sorghum	nucleus	74.02	62.82
Zm00001d015468_P001	Maize	mitochondrion	70.69	62.73
TraesCS7B01G400600.1	Wheat	nucleus	58.61	52.15
TraesCS7D01G484400.1	Wheat	nucleus	58.01	51.61
TraesCS7A01G497200.1	Wheat	nucleus	57.7	51.34
Os02t0610500-01	Rice	nucleus	41.99	41.87
Os04t0497700-01	Rice	nucleus	41.69	41.44
Os09t0240200-01	Rice	nucleus	29.91	29.55
Os06t0275000-01	Rice	mitochondrion	32.33	27.09
Os08t0249000-01	Rice	nucleus	11.78	21.67
Os09t0509700-01	Rice	nucleus	22.66	17.4
Os02t0724000-01	Rice	nucleus	20.54	16.71
Os07t0667300-01	Rice	nucleus	19.03	16.58
Os06t0298200-01	Rice	nucleus	20.24	16.42
Os08t0536300-01	Rice	nucleus	22.05	14.96
Os03t0351100-01	Rice	nucleus	17.82	14.64

Protein Annotations

MapMan:35.1	UniProt:A0A0P0VFH3	ProteinID:BAS77276.1	InterPro:CCT_domain	GO:GO:0000003	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007275	GO:GO:0008150	GO:GO:0008270	GO:GO:0009416	GO:GO:0009628	GO:GO:0009791
GO:GO:0009908	GO:GO:0009909	InterPro:IPR000315	InterPro:IPR010402	EnsemblPlantsGene:Os02g0178100	EnsemblPlants:Os02t0178100-01
PFAM:PF00643	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017	PANTHER:PTHR31319	PANTHER:PTHR31319:SF36
SMART:SM00336	UniParc:UPI0000DF05A5	InterPro:Znf_B-box	SEG:seg	:	:

Description

B-box-containing protein 3, CCT domain-containing gene 5, CCT (CO, CO-LIKE and TOC1) domain protein 5, CCT domain protein 5Similar to CONSTANS-like protein CO6. (Os02t0178100-01)

Coordinates

chr2:+:4315391..4316956

Molecular Weight (calculated)

33819.6 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.175

Length

331 amino acids

Sequence
(BLAST)

001: GACAVAPAAV HCRTCDGDGG GGGYLCAGCD AEHGRAGHER VWVCEVCELA PAAVTCKADA AALCAACDSD IHDANPLARR HERVPVHPIG SSAAPPPDAL
101: LLGGENDAAA AVDGGGGGKE VKLDFLFADF MDPYLGGSPE LARFPHADSV VPNHNGSAGP AMELGFAGGG GAAVKPSYSS YTAASLGNSG SSSEVGLVPD
201: AICGGGGGGI IELDFAQSKA AYLPYASTPS HSMSSSMDMG VAAPEMSDCA AAAAGRAYAA EGRAARLMRY REKRKNRRFE KTIRYASRKA YAETRPRVKG
301: RFAKRADDHD AAAPPPQIML DFAGYGVVPT F

Best Arabidopsis Sequence Match ( AT2G24790.1 )
(BLAST)

001: MASSSRLCDS CKSTAATLFC RADAAFLCGD CDGKIHTANK LASRHERVWL CEVCEQAPAH VTCKADAAAL CVTCDRDIHS ANPLSRRHER VPITPFYDAV
101: GPAKSASSSV NFVDEDGGDV TASWLLAKEG IEITNLFSDL DYPKIEVTSE ENSSGNDGVV PVQNKLFLNE DYFNFDLSAS KISQQGFNFI NQTVSTRTID
201: VPLVPESGGV TAEMTNTETP AVQLSPAERE ARVLRYREKR KNRKFEKTIR YASRKAYAEM RPRIKGRFAK RTDSRENDGG DVGVYGGFGV VPSF

Arabidopsis Description

COL3Zinc finger protein CONSTANS-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK53]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.