Factsheet for HORVU2Hr1G020760.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0667300-01	Rice	nucleus	32.49	33.95
EER99873	Sorghum	nucleus	31.23	30.02
Zm00001d007107_P001	Maize	nucleus	30.73	29.83
HORVU4Hr1G048700.1	Barley	nucleus, plastid	25.69	21.89
VIT_07s0104g01360.t01	Wine grape	nucleus	19.4	19.54
Solyc09g074560.2.1	Tomato	nucleus	17.88	19.03
KRH68113	Soybean	nucleus	16.62	18.91
KRG96381	Soybean	nucleus	16.62	18.8
PGSC0003DMT400029591	Potato	nucleus	17.88	18.73
AT2G47890.1	Thale cress	nucleus	15.62	18.67
KRH31920	Soybean	nucleus	15.62	17.82
CDX80141	Canola	nucleus	14.86	17.77
Bra004423.1-P	Field mustard	nucleus	14.86	17.66
CDY53026	Canola	nucleus	14.86	17.66
KRH71535	Soybean	nucleus	14.61	17.06
HORVU7Hr1G027560.1	Barley	nucleus	8.82	14.17
HORVU6Hr1G056000.2	Barley	nucleus	10.08	12.58
HORVU0Hr1G021050.5	Barley	cytosol	13.1	12.29
HORVU6Hr1G071950.2	Barley	nucleus	9.82	10.21
HORVU0Hr1G022380.1	Barley	cytosol	2.27	3.17
GSMUA_Achr6P13590_001	Banana	cytosol, mitochondrion, nucleus	0.25	1.12

Protein Annotations

EnsemblPlants:HORVU2Hr1G020760.2	EnsemblPlantsGene:HORVU2Hr1G020760	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008270	InterPro:CCT_domain	InterPro:IPR010402
PANTHER:PTHR31717	PANTHER:PTHR31717:SF10	PFAM:PF06203	PFscan:PS51017	SEG:seg	UniParc:UPI000B47D4EE
UniProt:A0A287HAS4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:57819986..57825525

Molecular Weight (calculated)

30637.2 Da

IEP (calculated)

8.878

GRAVY (calculated)

-0.379

Length

397 amino acids

Sequence
(BLAST)

001: MRSPRQQQGG RERETERAMS NSTGEEPGAV AVGXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXDGDKV WWPVWEEPQV LAFDDVIVPT TACHGLQPVL TSSSSPKNWS APCGELDGEV
201: LRQLGELAKS EEAAAYVEDA EPAGGDQLPP PWGSSDYAAT GHADLGALGA EPICAAAILQ VPPSQALFGC LRIKGVWRGM EGIKSPTTKI PFGTKPRTRD
301: SLLMFPSSKS RSLPERLSPF VGVSGAVSXA VQAEAPPAQA SKNVGGYDVV YPDRDKVISR YKEKRKNRMF GKQIRYESRK ARADGRVRIN GRFAKSS

Best Arabidopsis Sequence Match ( AT2G47890.1 )
(BLAST)

001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP

Arabidopsis Description

COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.