Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31920 | Soybean | nucleus | 89.71 | 87.64 |
| KRH68113 | Soybean | nucleus | 57.35 | 55.87 |
| KRG96381 | Soybean | nucleus | 57.65 | 55.84 |
| CDY53026 | Canola | nucleus | 42.35 | 43.11 |
| CDX80141 | Canola | nucleus | 41.76 | 42.77 |
| Bra004423.1-P | Field mustard | nucleus | 41.76 | 42.52 |
| Solyc09g074560.2.1 | Tomato | nucleus | 44.71 | 40.75 |
| VIT_07s0104g01360.t01 | Wine grape | nucleus | 47.06 | 40.61 |
| PGSC0003DMT400029591 | Potato | nucleus | 44.71 | 40.11 |
| AT2G47890.1 | Thale cress | nucleus | 39.12 | 40.06 |
| GSMUA_Achr6P13590_001 | Banana | cytosol, mitochondrion, nucleus | 8.82 | 33.71 |
| GSMUA_Achr3P08880_001 | Banana | nucleus | 34.12 | 28.43 |
| EER94860 | Sorghum | nucleus | 32.94 | 27.12 |
| Zm00001d029149_P001 | Maize | nucleus | 31.47 | 26.95 |
| Os07t0667300-01 | Rice | nucleus | 30.0 | 26.84 |
| TraesCS2D01G121400.1 | Wheat | nucleus | 30.0 | 26.77 |
| TraesCS4D01G167300.1 | Wheat | nucleus | 31.18 | 26.7 |
| TraesCS4B01G155800.1 | Wheat | nucleus | 30.59 | 26.2 |
| TraesCS2B01G140300.1 | Wheat | nucleus | 29.71 | 26.1 |
| TraesCS2A01G119600.1 | Wheat | nucleus | 29.12 | 25.92 |
| Os03t0351100-01 | Rice | nucleus | 30.59 | 25.81 |
| TraesCS4A01G140600.1 | Wheat | nucleus | 31.18 | 25.73 |
| KRH06865 | Soybean | nucleus | 28.82 | 25.72 |
| KRG94656 | Soybean | nucleus | 28.82 | 25.45 |
| EER99873 | Sorghum | nucleus | 30.29 | 24.94 |
| Zm00001d007107_P001 | Maize | nucleus | 30.0 | 24.94 |
| HORVU4Hr1G048700.1 | Barley | nucleus, plastid | 31.18 | 22.75 |
| KRH61628 | Soybean | nucleus, plastid | 20.59 | 22.65 |
| Zm00001d022500_P001 | Maize | nucleus | 12.06 | 22.65 |
| KRH52295 | Soybean | nucleus, plastid | 20.59 | 22.58 |
| KRG89998 | Soybean | nucleus | 26.18 | 21.76 |
| KRH17709 | Soybean | nucleus | 25.29 | 21.03 |
| KRH72628 | Soybean | nucleus | 25.0 | 20.99 |
| KRH18980 | Soybean | nucleus | 22.35 | 20.82 |
| KRG93763 | Soybean | nucleus | 21.76 | 20.22 |
| KRH16989 | Soybean | nucleus | 24.41 | 20.19 |
| KRH02915 | Soybean | nucleus | 22.06 | 20.05 |
| KRH45169 | Soybean | nucleus | 20.29 | 19.83 |
| KRH18308 | Soybean | nucleus | 20.88 | 19.67 |
| KRH26833 | Soybean | nucleus | 23.53 | 18.91 |
| KRH01455 | Soybean | nucleus | 19.41 | 18.75 |
| KRH22524 | Soybean | nucleus | 22.35 | 17.97 |
| HORVU2Hr1G020760.2 | Barley | cytosol, mitochondrion | 17.06 | 14.61 |
| KRG90917 | Soybean | nucleus | 17.35 | 13.47 |
| KRH35868 | Soybean | nucleus | 17.06 | 13.24 |
Protein Annotations
| EntrezGene:100796874 | MapMan:15.5.1.2 | EMBL:ACUP02000903 | InterPro:CCT_domain | EnsemblPlantsGene:GLYMA_02G152900 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008270 | InterPro:IPR000315 | InterPro:IPR010402 | UniProt:K7K8I7 | EnsemblPlants:KRH71535 | ProteinID:KRH71535 |
| ProteinID:KRH71535.1 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF16 |
| SMART:SM00336 | UniParc:UPI000296796A | InterPro:Znf_B-box | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:15702106..15705227
Molecular Weight (calculated)
38261.9 Da
IEP (calculated)
7.624
GRAVY (calculated)
-0.709
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNGSPNSKQ RTCDYCGSFT ALLYCRADSA KLCFFCDRKV HFPNQLFSKH KRAQLCDACG DSPASVLCSA ENSVLCQNCD CGKQKHLVSE AHQRRPLEGF
101: SGCPSVTELL TILGLSEKSL LSNEGTSQID DDLSDLHVWS APSINGLEDL ITTTASSQKK RKGACGRHKE EILSQLRELI KLEPDLIHAE RQGQFGNLPT
201: DFERDVEANI FPSYEVGVFC WHGESSDPRN QIVPSDTSPL RDYGDIVSAE DGSFTITVTH ANFNNQGKPS NSFNAENLSP TPKATPYELT SHERDSALLR
301: YREKKKSRRY DKHIRYESRK VRAESRMRIK GRFVRDETQK
101: SGCPSVTELL TILGLSEKSL LSNEGTSQID DDLSDLHVWS APSINGLEDL ITTTASSQKK RKGACGRHKE EILSQLRELI KLEPDLIHAE RQGQFGNLPT
201: DFERDVEANI FPSYEVGVFC WHGESSDPRN QIVPSDTSPL RDYGDIVSAE DGSFTITVTH ANFNNQGKPS NSFNAENLSP TPKATPYELT SHERDSALLR
301: YREKKKSRRY DKHIRYESRK VRAESRMRIK GRFVRDETQK
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.