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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G167300.1 Wheat nucleus 83.25 86.4
TraesCS4B01G155800.1 Wheat nucleus 82.77 85.89
HORVU4Hr1G048700.1 Barley nucleus, plastid 87.86 77.68
Os03t0351100-01 Rice nucleus 65.05 66.5
EER94860 Sorghum nucleus 61.65 61.5
Zm00001d029149_P001 Maize nucleus 58.98 61.21
TraesCS2A01G119600.1 Wheat nucleus 41.26 44.5
GSMUA_Achr6P13590_001 Banana cytosol, mitochondrion, nucleus 7.77 35.96
AT2G47890.1 Thale cress nucleus 26.21 32.53
KRH68113 Soybean nucleus 27.43 32.38
KRG96381 Soybean nucleus 27.43 32.19
KRH31920 Soybean nucleus 26.7 31.61
VIT_07s0104g01360.t01 Wine grape nucleus 29.85 31.22
KRH71535 Soybean nucleus 25.73 31.18
Solyc09g074560.2.1 Tomato nucleus 27.67 30.56
PGSC0003DMT400029591 Potato nucleus 27.91 30.34
CDY53026 Canola nucleus 24.03 29.64
Bra004423.1-P Field mustard nucleus 23.79 29.34
CDX80141 Canola nucleus 23.54 29.22
TraesCS7A01G263500.1 Wheat nucleus 25.97 21.84
TraesCS6A01G218900.1 Wheat nucleus 16.99 21.81
TraesCS6A01G286400.3 Wheat nucleus 20.39 21.54
TraesCS2A01G353900.1 Wheat nucleus 16.5 21.52
TraesCS7A01G218600.1 Wheat nucleus 20.63 21.46
TraesCS7A01G132100.1 Wheat nucleus 10.68 17.67
TraesCS7A01G211300.1 Wheat nucleus 16.26 17.4
TraesCS6A01G289400.1 Wheat nucleus 15.53 17.34
TraesCS6A01G150900.2 Wheat mitochondrion 14.32 16.16
TraesCS7A01G497200.1 Wheat nucleus 14.08 15.59
TraesCS5A01G166100.1 Wheat nucleus 11.65 14.72
Protein Annotations
EnsemblPlants:TraesCS4A01G140600.1EnsemblPlantsGene:TraesCS4A01G140600GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0008270InterPro:CCT_domainInterPro:IPR000315InterPro:IPR010402
InterPro:Znf_B-boxncoils:CoilPANTHER:PTHR31717PANTHER:PTHR31717:SF10PFAM:PF06203PFscan:PS50119
PFscan:PS51017SMART:SM00336TIGR:cd00021MapMan:15.5.1.2::
Description
No Description!
Coordinates
chr4A:+:216145121..216147476
Molecular Weight (calculated)
45258.8 Da
IEP (calculated)
5.595
GRAVY (calculated)
-0.646
Length
412 amino acids
Sequence
(BLAST)
001: MTEISDRATR GAAPTKLFST SPSFPPVVHH MDMGQDERQD PELPAMEKEL SADAVACDYC SGPQSVVYCR ADSARLCLPC DRHVHAANAV CSRHLRAPLC
101: AACRATGAVF RHGGPEFLCS NCDFGRSRDG ELPLHDRCTV QGYTGRPSAH DLAALLGVPD LDKPSAGKAD DGWWAIWEEP QVFSLEDLIV PTTSCHSFQP
201: LVTPSSPKIQ NSPEGKTNDE VIRQLRELAE VDMGGGQITP REEAEQAAHQ LPSWTESQHT TGNGDFGTDN SHEVATMPTP GYENGGWNNN DCHALKDDCK
301: TEYEQEQAPA NSAEACLSLF VQMSELCPSM SNGGMMDDSQ QANPGIGMPM QAFPKRSGFD VVAGLDRDIV ISRYKEKRRT RRFDKQVRYE SRKARADSRL
401: RIKGRFAKAN QS
Best Arabidopsis Sequence Match ( AT2G47890.1 )
(BLAST)
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.