Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68113 | Soybean | nucleus | 92.88 | 93.41 |
| KRH31920 | Soybean | nucleus | 57.55 | 58.05 |
| KRH71535 | Soybean | nucleus | 55.84 | 57.65 |
| Solyc09g074560.2.1 | Tomato | nucleus | 55.84 | 52.55 |
| PGSC0003DMT400029591 | Potato | nucleus | 54.99 | 50.92 |
| VIT_07s0104g01360.t01 | Wine grape | nucleus | 55.84 | 49.75 |
| AT2G47890.1 | Thale cress | nucleus | 44.44 | 46.99 |
| CDY53026 | Canola | nucleus | 44.16 | 46.41 |
| CDX80141 | Canola | nucleus | 43.87 | 46.39 |
| Bra004423.1-P | Field mustard | nucleus | 43.87 | 46.11 |
| GSMUA_Achr6P13590_001 | Banana | cytosol, mitochondrion, nucleus | 8.83 | 34.83 |
| GSMUA_Achr3P08880_001 | Banana | nucleus | 35.04 | 30.15 |
| Os07t0667300-01 | Rice | nucleus | 32.48 | 30.0 |
| TraesCS4D01G167300.1 | Wheat | nucleus | 32.19 | 28.46 |
| TraesCS2D01G121400.1 | Wheat | nucleus | 30.77 | 28.35 |
| Os03t0351100-01 | Rice | nucleus | 32.48 | 28.29 |
| TraesCS4B01G155800.1 | Wheat | nucleus | 31.91 | 28.21 |
| TraesCS2A01G119600.1 | Wheat | nucleus | 30.48 | 28.01 |
| Zm00001d029149_P001 | Maize | nucleus | 31.62 | 27.96 |
| Zm00001d007107_P001 | Maize | nucleus | 32.48 | 27.87 |
| EER94860 | Sorghum | nucleus | 32.48 | 27.6 |
| TraesCS4A01G140600.1 | Wheat | nucleus | 32.19 | 27.43 |
| TraesCS2B01G140300.1 | Wheat | nucleus | 30.2 | 27.39 |
| EER99873 | Sorghum | nucleus | 31.91 | 27.12 |
| KRH06865 | Soybean | nucleus | 28.21 | 25.98 |
| KRG94656 | Soybean | nucleus | 28.49 | 25.97 |
| Zm00001d022500_P001 | Maize | nucleus | 12.54 | 24.31 |
| HORVU4Hr1G048700.1 | Barley | nucleus, plastid | 31.91 | 24.03 |
| KRH61628 | Soybean | nucleus, plastid | 20.8 | 23.62 |
| KRH52295 | Soybean | nucleus, plastid | 20.8 | 23.55 |
| KRG89998 | Soybean | nucleus | 27.07 | 23.23 |
| KRH72628 | Soybean | nucleus | 26.78 | 23.21 |
| KRH17709 | Soybean | nucleus | 26.78 | 22.98 |
| KRH16989 | Soybean | nucleus | 26.21 | 22.38 |
| KRH18980 | Soybean | nucleus | 22.51 | 21.64 |
| KRH45169 | Soybean | nucleus | 21.37 | 21.55 |
| KRH02915 | Soybean | nucleus | 22.79 | 21.39 |
| KRG93763 | Soybean | nucleus | 21.65 | 20.77 |
| KRH26833 | Soybean | nucleus | 24.79 | 20.57 |
| KRH18308 | Soybean | nucleus | 20.8 | 20.22 |
| KRH01455 | Soybean | nucleus | 20.23 | 20.17 |
| KRH22524 | Soybean | nucleus | 23.65 | 19.62 |
| HORVU2Hr1G020760.2 | Barley | cytosol, mitochondrion | 18.8 | 16.62 |
| KRG90917 | Soybean | nucleus | 17.66 | 14.16 |
| KRH35868 | Soybean | nucleus | 17.38 | 13.93 |
Protein Annotations
| EntrezGene:100777428 | MapMan:15.5.1.2 | EMBL:ACUP02012154 | InterPro:CCT_domain | UniProt:D0EP04 | EnsemblPlantsGene:GLYMA_19G207100 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008270 | EMBL:GQ864263 | InterPro:IPR000315 | InterPro:IPR010402 | EnsemblPlants:KRG96381 |
| ProteinID:KRG96381 | ProteinID:KRG96381.1 | ProteinID:KRG96382.1 | PFAM:PF00643 | PFAM:PF06203 | PFscan:PS50119 |
| PFscan:PS51017 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF16 | SMART:SM00336 | UniParc:UPI0001B9B1E0 | InterPro:Znf_B-box |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:46240740..46245405
Molecular Weight (calculated)
38949.5 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.591
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAEARPCD YCGNSTALLY CRADSAKLCF SCDREVHSTN QLFSKHTRTL LCDACDDSPA TILCSTDTSV LCQNCDWENH NPALSDSLHE RRPLEGFTGC
101: PSVSELLSIV GFSDISKKSL LFSPQGSVAD GFFGASEIEG LSDMFVWDAP SFVTLDDLIS SSPSSHSFQA MKVPPLPKNR KAACGQHKEE ILSQLRELAK
201: SEPLDLEPYV QSGNLSLGFE RDPEADIFPS HEWHRESSEP MHQVVPPDPS MGTYTEEIPV KHSTSAVGEN HTYGDNEGKP SISLKSETLS TTPKAAACEL
301: TSQERDSALL RYKQKKKTRR FDKHIRYESR KVRAESRVRV KGRFAKMGHE H
101: PSVSELLSIV GFSDISKKSL LFSPQGSVAD GFFGASEIEG LSDMFVWDAP SFVTLDDLIS SSPSSHSFQA MKVPPLPKNR KAACGQHKEE ILSQLRELAK
201: SEPLDLEPYV QSGNLSLGFE RDPEADIFPS HEWHRESSEP MHQVVPPDPS MGTYTEEIPV KHSTSAVGEN HTYGDNEGKP SISLKSETLS TTPKAAACEL
301: TSQERDSALL RYKQKKKTRR FDKHIRYESR KVRAESRVRV KGRFAKMGHE H
001: MEAEEGHQRD RLCDYCDSSV ALVYCKADSA KLCLACDKQV HVANQLFAKH FRSLLCDSCN ESPSSLFCET ERSVLCQNCD WQHHTASSSL HSRRPFEGFT
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
101: GCPSVPELLA IVGLDDLTLD SGLLWESPEI VSLNDLIVSG GSGTHNFRAT DVPPLPKNRH ATCGKYKDEM IRQLRGLSRS EPGCLKFETP DAEIDAGFQF
201: LAPDLFSTCE LESGLKWFDQ QDHEDFPYCS LLKNLSESDE KPENVDRESS VMVPVSGCLN RCEEETVMVP VITSTRSMTH EINSLERNSA LSRYKEKKKS
301: RRYEKHIRYE SRKVRAESRT RIRGRFAKAA DP
Arabidopsis Description
COL13Zinc finger protein CONSTANS-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:O82256]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.