Factsheet for TraesCS7A01G132100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G032800.1	Wheat	nucleus	89.96	92.18
TraesCS7D01G131700.1	Wheat	nucleus	90.76	90.4
HORVU7Hr1G027560.1	Barley	nucleus	85.94	86.64
Zm00001d024200_P001	Maize	nucleus	65.46	58.63
EES14798	Sorghum	nucleus	68.27	58.22
Zm00001d049347_P001	Maize	nucleus	62.65	55.91
Os08t0249000-01	Rice	nucleus	36.55	50.56
TraesCS6A01G218900.1	Wheat	nucleus	39.76	30.84
TraesCS2A01G353900.1	Wheat	nucleus	34.54	27.22
TraesCS5A01G166100.1	Wheat	nucleus	35.34	26.99
TraesCS7A01G497200.1	Wheat	nucleus	36.55	24.46
TraesCS6A01G289400.1	Wheat	nucleus	34.14	23.04
TraesCS6A01G150900.2	Wheat	mitochondrion	33.33	22.74
TraesCS7A01G211300.1	Wheat	nucleus	33.73	21.82
TraesCS6A01G286400.3	Wheat	nucleus	21.29	13.59
TraesCS2A01G119600.1	Wheat	nucleus	20.48	13.35
TraesCS7A01G218600.1	Wheat	nucleus	18.47	11.62
TraesCS4A01G140600.1	Wheat	nucleus	17.67	10.68
TraesCS7A01G263500.1	Wheat	nucleus	20.08	10.2

Protein Annotations

EnsemblPlants:TraesCS7A01G132100.1	EnsemblPlantsGene:TraesCS7A01G132100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:CCT_domain	InterPro:IPR000315	InterPro:IPR010402
InterPro:Znf_B-box	PANTHER:PTHR31319	PANTHER:PTHR31319:SF35	PFAM:PF06203	PFscan:PS50119	PFscan:PS51017
SEG:seg	SMART:SM00336	TIGR:cd00021	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7A:-:85159979..85160827

Molecular Weight (calculated)

25503.6 Da

IEP (calculated)

7.878

GRAVY (calculated)

-0.186

Length

249 amino acids

Sequence
(BLAST)

001: MESEGSTSPN GGAGAACAVC GGAAALYCPA DAAALCVPCD AAVHSANPLA SRHDRVPLTA AVAATSGVYD LFVADDEGGS SWPTPGPGQR QGSPSSGSSG
101: FSNGGGVEMS LFDLLSDVNL VATGAGGSVP SDGGVAPLWL QPGLAADASA AWTPSWSPSE AVVVPSAADR AERVRRYREK RKNRKFHKTI RYASRKAYAE
201: ARPRIKGRFV KRPAADDSMS AGEAAKFWLS FSDNSVGFQV ASHGVVPSF

Best Arabidopsis Sequence Match ( AT5G57660.1 )
(BLAST)

001: MGFGLESIKS ISGGWGAAAR SCDACKSVTA AVFCRVDSAF LCIACDTRIH SFTRHERVWV CEVCEQAPAA VTCKADAAAL CVSCDADIHS ANPLASRHER
101: VPVETFFDSA ETAVAKISAS STFGILGSST TVDLTAVPVM ADDLGLCPWL LPNDFNEPAK IEIGTENMKG SSDFMFSDFD RLIDFEFPNS FNHHQNNAGG
201: DSLVPVQTKT EPLPLTNNDH CFDIDFCRSK LSAFTYPSQS VSHSVSTSSI EYGVVPDGNT NNSVNRSTIT SSTTGGDHQA SSMDREARVL RYREKRKNRK
301: FEKTIRYASR KAYAESRPRI KGRFAKRTET ENDDIFLSHV YASAAHAQYG VVPTF

Arabidopsis Description

COL5Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.