CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90815
KRG93763
KRH01455
KRH13468
KRH18308
KRH24006
KRH27971
KRH29310
KRH35955
KRH45169
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21150.1	KRG90815	AT1G68520.1	21798944
AT3G21150.1	KRH13468	AT1G68520.1	21798944
AT3G21150.1	KRH35955	AT1G68520.1	21798944
AT3G21150.1	KRH24006	AT3G48150.1	21798944
AT3G21150.1	KRH27971	AT3G48150.1	21798944
AT3G21150.1	KRH29310	AT3G48150.1	21798944
AT3G21150.1	KRH77487	AT3G48150.1	21798944
AT3G21150.1	KRG93763	AT5G15840.1	21798944
AT3G21150.1	KRH01455	AT5G15840.1	21798944
AT3G21150.1	KRH18308	AT5G15840.1	21798944
AT3G21150.1	KRH45169	AT5G15840.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47291	Soybean	nucleus	75.1	74.49
PGSC0003DMT400068177	Potato	nucleus	35.27	32.44
GSMUA_Achr9P13880_001	Banana	nucleus	17.01	27.89
KRH21598	Soybean	cytosol, nucleus, plastid	17.01	26.62
KRH26836	Soybean	cytosol, nucleus, plastid	13.28	25.81
KRH22520	Soybean	cytosol, nucleus, plastid	13.28	25.81
KRH10724	Soybean	cytosol, nucleus, plastid	16.18	25.66
KRH25450	Soybean	cytosol, nucleus, plastid	17.84	24.86
KRH56068	Soybean	cytosol, nucleus, plastid	17.84	24.29
GSMUA_Achr6P03790_001	Banana	nucleus	21.16	22.77
KRH26865	Soybean	nucleus	20.33	22.17
KRH22488	Soybean	nucleus	20.33	22.17
VIT_09s0054g00530.t01	Wine grape	cytosol, nucleus, plastid	23.65	21.92
Solyc06g063280.1.1	Tomato	nucleus	22.82	21.07
GSMUA_Achr1P10450_001	Banana	cytosol	19.5	19.67
GSMUA_Achr7P08700_001	Banana	cytosol	19.92	19.59
CDY32408	Canola	cytosol	17.84	19.55
Bra031255.1-P	Field mustard	cytosol	17.84	19.46
CDY19582	Canola	cytosol	17.43	19.0
KRH55436	Soybean	nucleus	17.01	18.98
AT3G21150.1	Thale cress	cytosol	17.43	18.67
CDY50075	Canola	nucleus	17.01	18.39
CDX82214	Canola	cytosol	17.43	18.26
Bra001815.1-P	Field mustard	cytosol	17.43	18.26
GSMUA_AchrUn_...	Banana	cytosol, extracellular, nucleus, plastid	17.43	14.24

Protein Annotations

EMBL:ACUP02004944	EnsemblPlants:KRH44613	EnsemblPlantsGene:GLYMA_08G221600	EntrezGene:102667703	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:IPR000315	InterPro:Znf_B-box
PANTHER:PTHR31717	PANTHER:PTHR31717:SF22	PFAM:PF00643	PFscan:PS50119	ProteinID:KRH44613	ProteinID:KRH44613.1
SEG:seg	SMART:SM00336	UniParc:UPI00022BE6A4	UniProt:I1KVQ6	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr8:-:17989681..17990939

Molecular Weight (calculated)

25972.7 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.222

Length

241 amino acids

Sequence
(BLAST)

001: MKGKTCELCD QQASLYCPSD SAFLCSDCDA AVHAANFLVA RHLRRLLCSK CNRFAGFHIS SGAISRHLSS TCSSCSPENP SADYSDSLPS SSTCVSSSES
101: CSTKQIKVEK KRSWSGSSVT DDASPAAKKR QRSGGSEEVF EKWSREIGLG LGLGVNGNRV ASNALSVCLG KWRWLPFRVA AATSFWLGLR FCGDRGLASC
201: QNLARLEAIS GVPVKLILAA HGDLARVFTH RRELQEGWGE S

Best Arabidopsis Sequence Match ( AT3G21150.1 )
(BLAST)

001: MVSFCELCGA EADLHCAADS AFLCRSCDAK FHASNFLFAR HFRRVICPNC KSLTQNFVSG PLLPWPPRTT CCSESSSSSC CSSLDCVSSS ELSSTTRDVN
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV

Arabidopsis Description

BBX32B-box zinc finger protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.