Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22520 | Soybean | cytosol, nucleus, plastid | 90.32 | 90.32 |
| VIT_12s0059g02510.t01 | Wine grape | nucleus | 46.77 | 45.67 |
| Solyc12g005750.1.1 | Tomato | cytosol | 39.52 | 44.95 |
| PGSC0003DMT400034275 | Potato | cytosol | 38.71 | 42.86 |
| CDY64254 | Canola | cytosol | 35.48 | 39.29 |
| Bra039558.1-P | Field mustard | cytosol | 30.65 | 39.18 |
| CDY22930 | Canola | cytosol | 30.65 | 39.18 |
| CDY57233 | Canola | cytosol | 30.65 | 39.18 |
| AT4G15248.1 | Thale cress | cytosol | 36.29 | 38.46 |
| CDY55658 | Canola | cytosol | 37.1 | 37.4 |
| CDX71395 | Canola | cytosol | 37.1 | 37.4 |
| Bra023857.1-P | Field mustard | cytosol | 37.1 | 37.4 |
| CDY33149 | Canola | cytosol, nucleus, plastid | 34.68 | 34.4 |
| AT3G21890.1 | Thale cress | cytosol | 33.06 | 33.88 |
| KRH21598 | Soybean | cytosol, nucleus, plastid | 24.19 | 19.48 |
| KRH10724 | Soybean | cytosol, nucleus, plastid | 23.39 | 19.08 |
| KRH25450 | Soybean | cytosol, nucleus, plastid | 25.0 | 17.92 |
| KRH56068 | Soybean | cytosol, nucleus, plastid | 25.0 | 17.51 |
| KRH22488 | Soybean | nucleus | 25.0 | 14.03 |
| KRH26865 | Soybean | nucleus | 25.0 | 14.03 |
| KRH47291 | Soybean | nucleus | 26.61 | 13.58 |
| KRH55436 | Soybean | nucleus | 23.39 | 13.43 |
| KRH44613 | Soybean | nucleus | 25.81 | 13.28 |
Protein Annotations
| EMBL:ACUP02007750 | EMBL:BT089238 | EnsemblPlants:KRH26836 | EnsemblPlantsGene:GLYMA_12G196200 | EntrezGene:100305571 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 |
| InterPro:Znf_B-box | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF26 | PFscan:PS50119 | ProteinID:KRH26836 | ProteinID:KRH26836.1 |
| SMART:SM00336 | UniParc:UPI0001B15821 | UniProt:C6SVP5 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr12:-:35742106..35742977
Molecular Weight (calculated)
14120.2 Da
IEP (calculated)
8.688
GRAVY (calculated)
-0.168
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MCKGAEGEKQ HGFCSSFLHK ESATRSAICC ELCGLQASLY CQADDAYLCK KCDKRVHEAN FLALRHIRCF LCNTCQNLTR RYLIGASLEV VLPANINWTI
101: RNLLNNRGIY RKCSRMHNSP SLFL
101: RNLLNNRGIY RKCSRMHNSP SLFL
001: MCRGFEKEEE RRSDNGGCQR LCTESHKAPV SCELCGENAT VYCEADAAFL CRKCDRWVHS ANFLARRHLR RVICTTCRKL TRRCLVGDNF NVVLPEIRMI
101: ARIEEHSSDH KIPFVFL
101: ARIEEHSSDH KIPFVFL
Arabidopsis Description
MIP1AB-box domain protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3I2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.