Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64254 | Canola | cytosol | 61.16 | 66.07 |
| Bra023857.1-P | Field mustard | cytosol | 66.12 | 65.04 |
| CDX71395 | Canola | cytosol | 66.12 | 65.04 |
| CDY55658 | Canola | cytosol | 66.12 | 65.04 |
| CDY33149 | Canola | cytosol, nucleus, plastid | 64.46 | 62.4 |
| AT4G15248.1 | Thale cress | cytosol | 49.59 | 51.28 |
| Solyc07g052620.1.1 | Tomato | nucleus | 38.84 | 36.15 |
| VIT_12s0059g02510.t01 | Wine grape | nucleus | 36.36 | 34.65 |
| KRH26836 | Soybean | cytosol, nucleus, plastid | 33.88 | 33.06 |
| KRH22520 | Soybean | cytosol, nucleus, plastid | 33.06 | 32.26 |
| PGSC0003DMT400067296 | Potato | nucleus | 32.23 | 30.0 |
| AT5G54470.1 | Thale cress | cytosol | 25.62 | 14.42 |
| AT3G21150.1 | Thale cress | cytosol | 25.62 | 13.78 |
| AT4G27310.1 | Thale cress | cytosol, nucleus, plastid | 24.79 | 13.45 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821744 | UniProt:A0A178VEW7 | EMBL:AB493627 | ProteinID:AEE76563.1 | ArrayExpress:AT3G21890 |
| EnsemblPlantsGene:AT3G21890 | RefSeq:AT3G21890 | TAIR:AT3G21890 | RefSeq:AT3G21890-TAIR-G | EnsemblPlants:AT3G21890.1 | TAIR:AT3G21890.1 |
| EMBL:AY086564 | ProteinID:BAB01366.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0009987 |
| GO:GO:0010224 | GO:GO:0030674 | GO:GO:0046872 | InterPro:IPR000315 | RefSeq:NP_188827.1 | ProteinID:OAP04436.1 |
| PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF26 | UniProt:Q9LRM4 | SMART:SM00336 |
| UniParc:UPI00000A8410 | InterPro:Znf_B-box | : | : | : | : |
Description
MIP1BBBX31 [Source:UniProtKB/TrEMBL;Acc:A0A178VEW7]
Coordinates
chr3:-:7708833..7709933
Molecular Weight (calculated)
13660.2 Da
IEP (calculated)
7.297
GRAVY (calculated)
-0.321
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRGLNNEES RRSDGGGCRS LCTRPSVPVR CELCDGDASV FCEADSAFLC RKCDRWVHGA NFLAWRHVRR VLCTSCQKLT RRCLVGDHDF HVVLPSVTTV
101: GETTVENRSE QDNHEVPFVF L
101: GETTVENRSE QDNHEVPFVF L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.