Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039558.1-P | Field mustard | cytosol | 52.99 | 63.92 |
| CDY22930 | Canola | cytosol | 52.99 | 63.92 |
| CDY57233 | Canola | cytosol | 52.14 | 62.89 |
| AT3G21890.1 | Thale cress | cytosol | 51.28 | 49.59 |
| VIT_12s0059g02510.t01 | Wine grape | nucleus | 41.03 | 37.8 |
| KRH26836 | Soybean | cytosol, nucleus, plastid | 38.46 | 36.29 |
| KRH22520 | Soybean | cytosol, nucleus, plastid | 37.61 | 35.48 |
| Solyc07g052620.1.1 | Tomato | nucleus | 37.61 | 33.85 |
| PGSC0003DMT400067296 | Potato | nucleus | 31.62 | 28.46 |
| AT3G21150.1 | Thale cress | cytosol | 29.06 | 15.11 |
| AT4G27310.1 | Thale cress | cytosol, nucleus, plastid | 24.79 | 13.0 |
| AT5G54470.1 | Thale cress | cytosol | 23.08 | 12.56 |
Protein Annotations
| MapMan:35.1 | EntrezGene:3769879 | ProteinID:ABF59389.1 | ProteinID:AEE83576.1 | EMBL:AL117321 | ArrayExpress:AT4G15248 |
| EnsemblPlantsGene:AT4G15248 | RefSeq:AT4G15248 | TAIR:AT4G15248 | RefSeq:AT4G15248-TAIR-G | EnsemblPlants:AT4G15248.1 | TAIR:AT4G15248.1 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008270 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0030674 | GO:GO:0046872 | InterPro:IPR000315 |
| RefSeq:NP_001031645.1 | PFAM:PF00643 | PO:PO:0000293 | PFscan:PS50119 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF22 |
| UniProt:Q1G3I2 | SMART:SM00336 | UniParc:UPI00005DC07B | InterPro:Znf_B-box | : | : |
Description
MIP1AB-box domain protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3I2]
Coordinates
chr4:+:8708841..8709482
Molecular Weight (calculated)
13562.4 Da
IEP (calculated)
8.218
GRAVY (calculated)
-0.380
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRGFEKEEE RRSDNGGCQR LCTESHKAPV SCELCGENAT VYCEADAAFL CRKCDRWVHS ANFLARRHLR RVICTTCRKL TRRCLVGDNF NVVLPEIRMI
101: ARIEEHSSDH KIPFVFL
101: ARIEEHSSDH KIPFVFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.