Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50075 | Canola | nucleus | 67.11 | 67.71 |
| Bra031255.1-P | Field mustard | cytosol | 63.11 | 64.25 |
| CDY19582 | Canola | cytosol | 62.22 | 63.35 |
| Bra001815.1-P | Field mustard | cytosol | 64.0 | 62.61 |
| CDX82214 | Canola | cytosol | 64.0 | 62.61 |
| CDY32408 | Canola | cytosol | 60.89 | 62.27 |
| AT4G15248.1 | Thale cress | cytosol | 15.11 | 29.06 |
| GSMUA_Achr9P13880_001 | Banana | nucleus | 17.33 | 26.53 |
| AT3G21890.1 | Thale cress | cytosol | 13.78 | 25.62 |
| VIT_09s0054g00530.t01 | Wine grape | cytosol, nucleus, plastid | 28.0 | 24.23 |
| Solyc06g063280.1.1 | Tomato | nucleus | 26.67 | 22.99 |
| GSMUA_Achr1P10450_001 | Banana | cytosol | 22.67 | 21.34 |
| GSMUA_Achr6P03790_001 | Banana | nucleus | 20.89 | 20.98 |
| GSMUA_Achr7P08700_001 | Banana | cytosol | 22.67 | 20.82 |
| PGSC0003DMT400068177 | Potato | nucleus | 23.11 | 19.85 |
| KRH47291 | Soybean | nucleus | 19.11 | 17.7 |
| AT4G27310.1 | Thale cress | cytosol, nucleus, plastid | 17.33 | 17.49 |
| KRH44613 | Soybean | nucleus | 18.67 | 17.43 |
| AT5G54470.1 | Thale cress | cytosol | 16.0 | 16.74 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus, plastid | 21.33 | 16.27 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821667 | UniProt:A0A178V704 | ProteinID:AEE76467.1 | EMBL:AK117844 | ArrayExpress:AT3G21150 |
| EnsemblPlantsGene:AT3G21150 | RefSeq:AT3G21150 | TAIR:AT3G21150 | RefSeq:AT3G21150-TAIR-G | EnsemblPlants:AT3G21150.1 | TAIR:AT3G21150.1 |
| ProteinID:BAB01458.1 | Symbol:BBX32 | EMBL:BT005244 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009640 | GO:GO:0009719 | GO:GO:0009785 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 |
| GO:GO:0009987 | GO:GO:0010017 | GO:GO:0010200 | GO:GO:0045892 | GO:GO:0046872 | InterPro:IPR000315 |
| RefSeq:NP_188752.1 | ProteinID:OAP01468.1 | PO:PO:0000293 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF22 | UniProt:Q9LJB7 |
| SMART:SM00336 | UniParc:UPI000000C5A1 | InterPro:Znf_B-box | SEG:seg | : | : |
Description
BBX32B-box zinc finger protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJB7]
Coordinates
chr3:-:7412445..7413727
Molecular Weight (calculated)
24717.3 Da
IEP (calculated)
8.502
GRAVY (calculated)
-0.118
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSFCELCGA EADLHCAADS AFLCRSCDAK FHASNFLFAR HFRRVICPNC KSLTQNFVSG PLLPWPPRTT CCSESSSSSC CSSLDCVSSS ELSSTTRDVN
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.