Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P10450_001 | Banana | cytosol | 48.16 | 49.37 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus, plastid | 49.8 | 41.36 |
| GSMUA_Achr9P13880_001 | Banana | nucleus | 21.63 | 36.05 |
| GSMUA_Achr6P03790_001 | Banana | nucleus | 30.2 | 33.04 |
| Solyc06g063280.1.1 | Tomato | nucleus | 25.31 | 23.75 |
| AT3G21150.1 | Thale cress | cytosol | 20.82 | 22.67 |
| CDY19582 | Canola | cytosol | 20.41 | 22.62 |
| Bra031255.1-P | Field mustard | cytosol | 20.0 | 22.17 |
| CDY50075 | Canola | nucleus | 20.0 | 21.97 |
| VIT_09s0054g00530.t01 | Wine grape | cytosol, nucleus, plastid | 23.27 | 21.92 |
| GSMUA_Achr8P07440_001 | Banana | nucleus | 16.33 | 21.39 |
| PGSC0003DMT400068177 | Potato | nucleus | 22.04 | 20.61 |
| CDY32408 | Canola | cytosol | 18.37 | 20.45 |
| KRH44613 | Soybean | nucleus | 19.59 | 19.92 |
| Bra001815.1-P | Field mustard | cytosol | 18.37 | 19.57 |
| CDX82214 | Canola | cytosol | 18.37 | 19.57 |
| GSMUA_Achr3P22980_001 | Banana | cytosol, nucleus, plastid | 16.33 | 19.23 |
| KRH47291 | Soybean | nucleus | 17.96 | 18.11 |
| GSMUA_Achr11P... | Banana | nucleus | 16.33 | 18.02 |
| GSMUA_Achr5P26340_001 | Banana | nucleus | 20.41 | 13.93 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P08700_001 | EnsemblPlants:GSMUA_Achr7T08700_001 | EnsemblPlantsGene:GSMUA_Achr7G08700_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31717 |
| PANTHER:PTHR31717:SF22 | SEG:seg | SMART:SM00336 | UniParc:UPI00029531C2 | UniProt:M0TFW0 | MapMan:35.2 |
Description
B-box zinc finger family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G08700_001]
Coordinates
chr7:-:6762367..6763104
Molecular Weight (calculated)
25904.0 Da
IEP (calculated)
8.507
GRAVY (calculated)
-0.012
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQRPACELC DGEAAVFCGP DAAFLCWACD ASVHGANFLV ARHVRRVACN ACRSLDTARH VSGAAPQRVS PLCASCDPDP SPSHSAISSS SSSCLSTSES
101: RAAHRAAKPA APRRATAKWQ GRDADKRAAG VLLCWSRRMG LRSGRTCMEV AARVVCACEE ATAALPLRVA LAALPLRVAL AAALWFATKL CKDETSPAEK
201: GADATLRRLE ACSGVPARLI LAAESRIARF AERIRVAEEG WAECS
101: RAAHRAAKPA APRRATAKWQ GRDADKRAAG VLLCWSRRMG LRSGRTCMEV AARVVCACEE ATAALPLRVA LAALPLRVAL AAALWFATKL CKDETSPAEK
201: GADATLRRLE ACSGVPARLI LAAESRIARF AERIRVAEEG WAECS
001: MVSFCELCGA EADLHCAADS AFLCRSCDAK FHASNFLFAR HFRRVICPNC KSLTQNFVSG PLLPWPPRTT CCSESSSSSC CSSLDCVSSS ELSSTTRDVN
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV
Arabidopsis Description
BBX32B-box zinc finger protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.