Factsheet for Bra031255.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000943.1-P
Bra004035.1-P
Bra008669.1-P
Bra018081.1-P
Bra033769.1-P
Bra033925.1-P
Bra037384.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21150.1	Bra004035.1-P	AT1G68520.1	21798944
AT3G21150.1	Bra033925.1-P	AT1G68520.1	21798944
AT3G21150.1	Bra018081.1-P	AT3G48150.1	21798944
AT3G21150.1	Bra033769.1-P	AT3G48150.1	21798944
AT3G21150.1	Bra000943.1-P	AT4G01090.1	21798944
AT3G21150.1	Bra037384.1-P	AT4G01090.1	21798944
AT3G21150.1	Bra008669.1-P	AT5G15840.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19582	Canola	cytosol	97.74	97.74
CDY50075	Canola	nucleus	81.0	80.27
Bra001815.1-P	Field mustard	cytosol	67.87	65.22
AT3G21150.1	Thale cress	cytosol	64.25	63.11
Bra039558.1-P	Field mustard	cytosol	13.12	29.9
Bra023857.1-P	Field mustard	cytosol	14.03	25.2
GSMUA_Achr9P13880_001	Banana	nucleus	16.74	25.17
VIT_09s0054g00530.t01	Wine grape	cytosol, nucleus, plastid	28.05	23.85
Solyc06g063280.1.1	Tomato	nucleus	26.24	22.22
GSMUA_Achr1P10450_001	Banana	cytosol	23.98	22.18
PGSC0003DMT400068177	Potato	nucleus	23.98	20.23
GSMUA_Achr7P08700_001	Banana	cytosol	22.17	20.0
Bra019058.1-P	Field mustard	cytosol	18.1	19.51
KRH47291	Soybean	nucleus	20.81	18.93
Bra002986.1-P	Field mustard	cytosol	15.38	18.68
Bra022722.1-P	Field mustard	cytosol, nucleus, plastid	16.74	18.41
GSMUA_Achr6P03790_001	Banana	nucleus	18.55	18.3
KRH44613	Soybean	nucleus	19.46	17.84
Bra026361.1-P	Field mustard	cytosol, nucleus, plastid	18.55	17.83
Bra010408.1-P	Field mustard	cytosol, nucleus, plastid	18.1	16.6
GSMUA_AchrUn_...	Banana	cytosol, extracellular, nucleus, plastid	19.46	14.58

Protein Annotations

EnsemblPlants:Bra031255.1	EnsemblPlants:Bra031255.1-P	EnsemblPlantsGene:Bra031255	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31717
PANTHER:PTHR31717:SF22	SEG:seg	SMART:SM00336	UniParc:UPI000254791A	UniProt:M4ER32	MapMan:35.1

Description

AT3G21150 (E=5e-026) | zinc finger (B-box type) family protein

Coordinates

chrA05:+:16627654..16628319

Molecular Weight (calculated)

23662.4 Da

IEP (calculated)

8.835

GRAVY (calculated)

-0.139

Length

221 amino acids

Sequence
(BLAST)

001: MVKSCELCGA EADLHCAADS AFLCRSCDAK FHASNILFSR HVRRIICPGC KSLTGDSFSG PLSPSPPTTT CCSGTSSESS CCSSLDRVSS SELSSTTREK
101: TKTSRAVVNK ARGREKGVLV KWCDELGLDG DSRNAVVSLA SLALAVEKPT KVILAAAFWF GVRNSPKKVM RPSLKKVADV SGVAAGMIRA VESKLARAVT
201: LQLKRWRVDS EEGWGENENV M

Best Arabidopsis Sequence Match ( AT3G21150.1 )
(BLAST)

001: MVSFCELCGA EADLHCAADS AFLCRSCDAK FHASNFLFAR HFRRVICPNC KSLTQNFVSG PLLPWPPRTT CCSESSSSSC CSSLDCVSSS ELSSTTRDVN
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV

Arabidopsis Description

BBX32B-box zinc finger protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.