Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26836 | Soybean | cytosol, nucleus, plastid | 90.32 | 90.32 |
| VIT_12s0059g02510.t01 | Wine grape | nucleus | 44.35 | 43.31 |
| Solyc12g005750.1.1 | Tomato | cytosol | 36.29 | 41.28 |
| PGSC0003DMT400034275 | Potato | cytosol | 37.1 | 41.07 |
| Bra039558.1-P | Field mustard | cytosol | 31.45 | 40.21 |
| CDY22930 | Canola | cytosol | 31.45 | 40.21 |
| CDY57233 | Canola | cytosol | 31.45 | 40.21 |
| CDY64254 | Canola | cytosol | 36.29 | 40.18 |
| AT4G15248.1 | Thale cress | cytosol | 35.48 | 37.61 |
| CDY55658 | Canola | cytosol | 36.29 | 36.59 |
| CDX71395 | Canola | cytosol | 36.29 | 36.59 |
| Bra023857.1-P | Field mustard | cytosol | 36.29 | 36.59 |
| CDY33149 | Canola | cytosol, nucleus, plastid | 34.68 | 34.4 |
| AT3G21890.1 | Thale cress | cytosol | 32.26 | 33.06 |
| KRH21598 | Soybean | cytosol, nucleus, plastid | 24.19 | 19.48 |
| KRH10724 | Soybean | cytosol, nucleus, plastid | 23.39 | 19.08 |
| KRH25450 | Soybean | cytosol, nucleus, plastid | 24.19 | 17.34 |
| KRH56068 | Soybean | cytosol, nucleus, plastid | 24.19 | 16.95 |
| KRH47291 | Soybean | nucleus | 26.61 | 13.58 |
| KRH22488 | Soybean | nucleus | 24.19 | 13.57 |
| KRH26865 | Soybean | nucleus | 24.19 | 13.57 |
| KRH55436 | Soybean | nucleus | 23.39 | 13.43 |
| KRH44613 | Soybean | nucleus | 25.81 | 13.28 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02008417 | EnsemblPlantsGene:GLYMA_13G306300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | UniProt:I1M418 | InterPro:IPR000315 | EnsemblPlants:KRH22520 |
| ProteinID:KRH22520 | ProteinID:KRH22520.1 | PFAM:PF00643 | PANTHER:PTHR31717 | PANTHER:PTHR31717:SF26 | SMART:SM00336 |
| UniParc:UPI0001E24264 | InterPro:Znf_B-box | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:40254957..40256290
Molecular Weight (calculated)
14009.1 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.190
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MCKGAEGEKQ HGFCSSYLHK ECATRSATCC ELCGLQASLY CQADDAYLCR KCDKRVHEAN FLALRHIRCF LCNTCQNLTR RYLIGASIEV VLPANINWTI
101: GNLPSNRGIH RKCSRMHNNL SLLL
101: GNLPSNRGIH RKCSRMHNNL SLLL
001: MCRGFEKEEE RRSDNGGCQR LCTESHKAPV SCELCGENAT VYCEADAAFL CRKCDRWVHS ANFLARRHLR RVICTTCRKL TRRCLVGDNF NVVLPEIRMI
101: ARIEEHSSDH KIPFVFL
101: ARIEEHSSDH KIPFVFL
Arabidopsis Description
MIP1AB-box domain protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3I2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.