Factsheet for Bra001264.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07979	Canola	nucleus	96.87	96.59
CDX74034	Canola	nucleus	99.43	89.49
Bra040020.1-P	Field mustard	nucleus	88.89	85.25
AT3G07650.1	Thale cress	nucleus	88.03	83.06
Bra029666.1-P	Field mustard	nucleus	91.17	82.9
Bra020709.1-P	Field mustard	nucleus	68.66	68.66
Bra037499.1-P	Field mustard	nucleus	64.67	65.8
KRH72628	Soybean	nucleus	64.67	56.05
KRG89998	Soybean	nucleus	65.24	55.99
KRH17709	Soybean	nucleus	65.24	55.99
KRH16989	Soybean	nucleus	63.53	54.26
VIT_12s0057g01350.t01	Wine grape	nucleus	62.96	53.25
VIT_00s0194g00070.t01	Wine grape	nucleus	60.97	51.69
PGSC0003DMT400074143	Potato	nucleus	58.12	50.0
Os06t0298200-01	Rice	nucleus	57.83	49.75
KXG19836	Sorghum	nucleus	57.55	49.15
Os02t0724000-01	Rice	nucleus	56.41	48.65
Solyc05g020020.2.1	Tomato	nucleus	56.41	48.29
Solyc07g045180.2.1	Tomato	nucleus	57.27	48.09
TraesCS6A01G286400.3	Wheat	nucleus	53.28	47.95
PGSC0003DMT400013624	Potato	nucleus	56.41	47.94
PGSC0003DMT400044878	Potato	nucleus	56.13	47.93
TraesCS7A01G218600.1	Wheat	nucleus	53.85	47.73
TraesCS7D01G220300.1	Wheat	nucleus	53.85	47.73
TraesCS6B01G315400.1	Wheat	nucleus	52.71	47.44
HORVU6Hr1G071950.2	Barley	nucleus	51.57	47.38
TraesCS6D01G267100.1	Wheat	nucleus	52.71	47.19
GSMUA_Achr3P04260_001	Banana	nucleus	55.27	46.19
EES07342	Sorghum	nucleus	52.99	45.81
Zm00001d045804_P003	Maize	nucleus	56.7	45.64
Zm00001d051684_P007	Maize	nucleus	52.71	45.57
GSMUA_Achr7P20150_001	Banana	nucleus	52.42	44.66
GSMUA_Achr10P...	Banana	nucleus	50.71	44.39
GSMUA_Achr9P12860_001	Banana	nucleus	52.71	44.36
GSMUA_Achr5P22460_001	Banana	nucleus	49.29	44.25
GSMUA_Achr5P04270_001	Banana	nucleus	52.42	43.6
Solyc12g006240.1.1	Tomato	nucleus	32.76	42.75
TraesCS7B01G125500.1	Wheat	cytosol, nucleus, plastid	40.74	42.43
Zm00001d017885_P001	Maize	nucleus	46.15	35.14
Bra023858.1-P	Field mustard	nucleus	31.05	28.24
Bra030070.1-P	Field mustard	nucleus	23.65	26.95
Bra023541.1-P	Field mustard	nucleus	22.79	25.4
Bra032061.1-P	Field mustard	nucleus	20.51	24.91
Bra020425.1-P	Field mustard	nucleus, plastid	22.79	23.39
Bra008668.1-P	Field mustard	nucleus	22.22	23.15
Bra041077.1-P	Field mustard	nucleus	26.21	22.55
Bra004423.1-P	Field mustard	nucleus	21.08	22.16
Bra036528.1-P	Field mustard	nucleus	21.65	22.03
Bra010908.1-P	Field mustard	nucleus	25.93	21.77
Bra008669.1-P	Field mustard	nucleus	22.51	21.58
Bra009805.1-P	Field mustard	nucleus	21.37	21.37
Bra021464.1-P	Field mustard	nucleus	19.37	21.18
Bra002709.1-P	Field mustard	nucleus	12.54	20.18
Bra001043.1-P	Field mustard	nucleus	10.83	16.67

Protein Annotations

MapMan:15.5.1.2	EnsemblPlantsGene:Bra001264	EnsemblPlants:Bra001264.1	EnsemblPlants:Bra001264.1-P	InterPro:CCT_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0008270	InterPro:IPR000315	InterPro:IPR010402	UniProt:M4CAN5	PFAM:PF06203	PFscan:PS50119
PFscan:PS51017	PANTHER:PTHR31717	PANTHER:PTHR31717:SF39	SMART:SM00336	UniParc:UPI00025404D0	InterPro:Znf_B-box
SEG:seg	:	:	:	:	:

Description

AT3G07650 (E=2e-152) COL9 | COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding

Coordinates

chrA03:+:15568412..15569869

Molecular Weight (calculated)

38640.4 Da

IEP (calculated)

5.452

GRAVY (calculated)

-0.703

Length

351 amino acids

Sequence
(BLAST)

001: MGYMCDFCGD QRSMVYCRSD SACLCLSCDR SVHSANALSK RHSRTLVCER CNAQPATVRC VEERVSLCQN CDWSGHNNNS TSSNDHKRQT ISCYSGCPSS
101: SELASIWSFC SELAGESACE QEMGMMNIDD DGQTKENCNE DKKDETSSAA QATNASFAKD VGVCEDDFYG NLGMDEVDLA LDNYEELFGT AFNTSVHLFG
201: QGGVDSLFQK HQQAAAPEGG NLVQPAESND DSFMSSKTEP IICYTSKPAH SNISFSGVTG ESSAGDFQEC GASSSVQLTG EPPWHPQTSQ SVTRNNAVMR
301: YKEKKKARKF DKRVRYASRK ARADVRRRVK GRFVKAGEAY DYDPLTPTRS Y

Best Arabidopsis Sequence Match ( AT3G07650.3 )
(BLAST)

001: MGYMCDFCGE QRSMVYCRSD AACLCLSCDR SVHSANALSK RHSRTLVCER CNAQPATVRC VEERVSLCQN CDWSGHNNSN NNNSSSSSTS PQQHKRQTIS
101: CYSGCPSSSE LASIWSFCLD LAGQSICEQE LGMMNIDDDG PTDKKTCNED KKDVLVGSSS IPETSSVPQG KSSSAKDVGM CEDDFYGNLG MDEVDMALEN
201: YEELFGTAFN PSEELFGHGG IDSLFHKHQT APEGGNSVQP AGSNDSFMSS KTEPIICFAS KPAHSNISFS GVTGESSAGD FQECGASSSI QLSGEPPWYP
301: PTLQDNNACS HSVTRNNAVM RYKEKKKARK FDKRVRYASR KARADVRRRV KGRFVKAGEA YDYDPLTPTR SY

Arabidopsis Description

COL9AT3G07650 protein [Source:UniProtKB/TrEMBL;Acc:A1A6H1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.