Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18680_001 | Banana | nucleus | 38.54 | 42.05 |
| CDX91989 | Canola | nucleus | 65.62 | 27.63 |
| CDX74261 | Canola | nucleus | 63.54 | 26.75 |
| CDY26470 | Canola | nucleus | 85.42 | 24.62 |
| CDX69493 | Canola | nucleus | 84.38 | 24.04 |
| CDX85529 | Canola | nucleus | 78.12 | 23.66 |
| CDX90969 | Canola | nucleus | 73.96 | 22.12 |
| CDY49730 | Canola | nucleus | 45.83 | 20.18 |
| CDY71818 | Canola | nucleus | 58.33 | 18.92 |
| CDY71884 | Canola | nucleus | 57.29 | 18.64 |
| CDY02749 | Canola | nucleus, plastid | 48.96 | 18.15 |
| GSMUA_Achr3P28130_001 | Banana | nucleus | 51.04 | 17.5 |
| GSMUA_Achr9P22690_001 | Banana | nucleus, plastid | 50.0 | 16.49 |
| CDY45597 | Canola | nucleus | 46.88 | 15.57 |
| CDY36171 | Canola | nucleus | 46.88 | 15.52 |
| CDX88145 | Canola | nucleus | 45.83 | 14.97 |
| CDY19821 | Canola | nucleus | 45.83 | 14.97 |
| CDY26469 | Canola | nucleus | 55.21 | 14.48 |
| CDX69494 | Canola | nucleus | 55.21 | 14.4 |
| CDX87105 | Canola | nucleus, plastid | 45.83 | 13.88 |
| CDY58843 | Canola | nucleus, plastid | 48.96 | 13.74 |
| CDX80476 | Canola | nucleus, plastid | 45.83 | 13.37 |
| CDY25892 | Canola | nucleus | 42.71 | 12.31 |
| CDY07979 | Canola | nucleus | 33.33 | 9.09 |
| CDY05691 | Canola | nucleus | 32.29 | 8.93 |
| CDY48428 | Canola | nucleus | 25.0 | 8.89 |
| CDY48743 | Canola | nucleus | 32.29 | 8.86 |
| CDY35952 | Canola | nucleus | 33.33 | 8.67 |
| CDY28029 | Canola | nucleus | 33.33 | 8.6 |
| CDY22125 | Canola | nucleus | 32.29 | 8.47 |
| CDX80141 | Canola | nucleus | 29.17 | 8.43 |
| CDY53026 | Canola | nucleus | 29.17 | 8.38 |
| CDX86318 | Canola | nucleus | 31.25 | 8.38 |
| CDX85321 | Canola | nucleus | 31.25 | 8.36 |
| CDY15696 | Canola | nucleus | 25.0 | 8.3 |
| CDX74034 | Canola | nucleus | 33.33 | 8.21 |
| CDY64255 | Canola | nucleus | 28.12 | 7.28 |
| CDY55657 | Canola | nucleus | 29.17 | 7.25 |
| CDY66639 | Canola | nucleus | 27.08 | 6.45 |
| CDY11755 | Canola | nucleus | 26.04 | 6.36 |
| CDX90119 | Canola | nucleus | 27.08 | 6.21 |
| CDY68819 | Canola | nucleus | 25.0 | 6.2 |
| CDY30385 | Canola | nucleus | 25.0 | 6.2 |
| CDY04213 | Canola | nucleus | 11.46 | 3.27 |
| CDY07393 | Canola | nucleus | 14.58 | 2.61 |
Protein Annotations
| EnsemblPlants:CDY69474 | EnsemblPlantsGene:GSBRNA2T00088135001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 | PANTHER:PTHR31319 |
| PANTHER:PTHR31319:SF39 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:CDY69474 | ProteinID:CDY69474.1 | SEG:seg |
| UniParc:UPI0004EE36A6 | UniProt:A0A078JRN0 | MapMan:35.1 | : | : | : |
Description
BnaCnng63700DBnaCnng63700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRN0]
Coordinates
chrLK039524:-:313..603
Molecular Weight (calculated)
11296.6 Da
IEP (calculated)
11.162
GRAVY (calculated)
-1.169
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MVSLVPESTT SDTTVSHPRS PTETTESTQM LSPMDRKATR VMRYREKKKT RKFEKRIRYA SRKKYAEKRP RIKGRFAKRN EVDADQAFST MAMFDT
001: MLKVESNWAQ ACDTCRSAAC TVYCRADSAY LCSSCDAQVH AANRLASRHE RVRVCQSCER APAAFFCKAD AASLCTTCDS EIHSANPLAR RHQRVPILPI
101: SEYSYSSTAT NHSCETTVTD PENRLVLGQE EEDEDEAEAA SWLLPNSGKN SGNNNGFSIG DEFLNLVDYS SSDKQFTDQS NQYQLDCNVP QRSYGEDGVV
201: PLQIEVSKGM YQEQQNFQLS INCGSWGALR SSNGSLSHMV NVSSMDLGVV PESTTSDATV SNPRSPKAVT DQPPYPPAQM LSPRDREARV LRYREKKKMR
301: KFEKTIRYAS RKAYAEKRPR IKGRFAKKKD VDEEANQAFS TMITFDTGYG IVPSF
101: SEYSYSSTAT NHSCETTVTD PENRLVLGQE EEDEDEAEAA SWLLPNSGKN SGNNNGFSIG DEFLNLVDYS SSDKQFTDQS NQYQLDCNVP QRSYGEDGVV
201: PLQIEVSKGM YQEQQNFQLS INCGSWGALR SSNGSLSHMV NVSSMDLGVV PESTTSDATV SNPRSPKAVT DQPPYPPAQM LSPRDREARV LRYREKKKMR
301: KFEKTIRYAS RKAYAEKRPR IKGRFAKKKD VDEEANQAFS TMITFDTGYG IVPSF
Arabidopsis Description
COL1Zinc finger protein CONSTANS-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:O50055]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.