Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G68190.2 | Thale cress | extracellular, golgi, vacuole | 75.89 | 66.23 |
| CDY07393 | Canola | nucleus | 94.35 | 59.14 |
| VIT_01s0011g04240.t01 | Wine grape | nucleus | 40.18 | 37.82 |
| KRG90917 | Soybean | nucleus | 38.69 | 29.68 |
| KRH35868 | Soybean | nucleus | 38.69 | 29.68 |
| PGSC0003DMT400015373 | Potato | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 41.37 | 28.43 |
| Solyc04g007470.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 40.18 | 28.42 |
| CDY07979 | Canola | nucleus | 27.68 | 26.42 |
| CDY05691 | Canola | nucleus | 26.79 | 25.94 |
| CDY35952 | Canola | nucleus | 28.27 | 25.75 |
| CDY48743 | Canola | nucleus | 26.49 | 25.43 |
| CDY22125 | Canola | nucleus | 27.68 | 25.41 |
| CDY28029 | Canola | nucleus | 27.68 | 25.0 |
| CDX85321 | Canola | nucleus | 25.6 | 23.96 |
| CDX86318 | Canola | nucleus | 25.3 | 23.74 |
| CDX74034 | Canola | nucleus | 27.08 | 23.33 |
| CDY15696 | Canola | nucleus | 19.64 | 22.84 |
| CDY19821 | Canola | nucleus | 17.86 | 20.41 |
| CDX88145 | Canola | nucleus | 17.56 | 20.07 |
| CDY55657 | Canola | nucleus | 22.32 | 19.43 |
| CDY64255 | Canola | nucleus | 21.43 | 19.41 |
| CDY45597 | Canola | nucleus | 16.67 | 19.38 |
| CDY36171 | Canola | nucleus | 16.67 | 19.31 |
| CDY11755 | Canola | nucleus | 22.32 | 19.08 |
| CDY53026 | Canola | nucleus | 18.75 | 18.86 |
| CDY66639 | Canola | nucleus | 22.62 | 18.86 |
| CDX80141 | Canola | nucleus | 18.45 | 18.67 |
| CDX87105 | Canola | nucleus, plastid | 17.56 | 18.61 |
| CDY30385 | Canola | nucleus | 20.83 | 18.09 |
| CDY68819 | Canola | nucleus | 20.83 | 18.09 |
| CDX80476 | Canola | nucleus, plastid | 17.56 | 17.93 |
| CDX90119 | Canola | nucleus | 21.73 | 17.42 |
| CDY02749 | Canola | nucleus, plastid | 13.39 | 17.37 |
| CDX85529 | Canola | nucleus | 15.77 | 16.72 |
| CDY26470 | Canola | nucleus | 16.07 | 16.22 |
| CDX90969 | Canola | nucleus | 15.48 | 16.2 |
| CDX69493 | Canola | nucleus | 16.07 | 16.02 |
| CDY71884 | Canola | nucleus | 13.99 | 15.93 |
| CDY71818 | Canola | nucleus | 13.69 | 15.54 |
| CDY58843 | Canola | nucleus, plastid | 15.48 | 15.2 |
| CDY25892 | Canola | nucleus | 14.88 | 15.02 |
| CDX69494 | Canola | nucleus | 15.48 | 14.13 |
| CDY26469 | Canola | nucleus | 15.18 | 13.93 |
| CDY69474 | Canola | nucleus, plastid | 3.27 | 11.46 |
| CDY49730 | Canola | nucleus | 5.65 | 8.72 |
| CDX74261 | Canola | nucleus | 5.65 | 8.33 |
| CDY48428 | Canola | nucleus | 6.55 | 8.15 |
| CDX91989 | Canola | nucleus | 5.36 | 7.89 |
Protein Annotations
| EnsemblPlants:CDY04213 | EnsemblPlantsGene:GSBRNA2T00117927001 | GO:A0A078EX99 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31717 |
| PANTHER:PTHR31717:SF40 | PFscan:PS50119 | ProteinID:CDY04213 | ProteinID:CDY04213.1 | SEG:seg | SMART:SM00336 |
| UniParc:UPI0004EC0625 | MapMan:15.5.1.2 | : | : | : | : |
Description
BnaC06g26020D
Coordinates
chrLK031950:+:164949..166558
Molecular Weight (calculated)
37741.6 Da
IEP (calculated)
6.434
GRAVY (calculated)
-0.449
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLCEVCKA YRAVVYCIAD AASLCLTCDA KVHSANALSG RHLRTLLCGF CKNQPCVVRC LDHKMFLCNG CNEKIHGVVS SKHVRHDVRC YTGCPSAKDF
101: AVMWGFRVMD NDVSLEKSFA MAKPKVQREA GFVLEQILEL EKLQLREENK VLPLTEHADP FPLELPKKSE ECLVDLPQTG KDLIVDFSHL SSSSTLGDSF
201: WECKSPFNKN NQLWHQNLQD IGVCEDTACD DDDFHIPDID LTFQNFEELF GADPDPTTDN YKLCEMNTFS SPSSKPASSS LSFSRSNGGG SSKTHYSHNH
301: SEEAISICSP FSNNVRQKAI SRLKEKKRAR TEEKQV
101: AVMWGFRVMD NDVSLEKSFA MAKPKVQREA GFVLEQILEL EKLQLREENK VLPLTEHADP FPLELPKKSE ECLVDLPQTG KDLIVDFSHL SSSSTLGDSF
201: WECKSPFNKN NQLWHQNLQD IGVCEDTACD DDDFHIPDID LTFQNFEELF GADPDPTTDN YKLCEMNTFS SPSSKPASSS LSFSRSNGGG SSKTHYSHNH
301: SEEAISICSP FSNNVRQKAI SRLKEKKRAR TEEKQV
001: MKKLLKTDRR SFCHQSLIFL VLLSGGIFYM LCIIIIENME RVCEFCKAYR AVVYCIADTA NLCLTCDAKV HSANSLSGRH LRTVLCDSCK NQPCVVRCFD
101: HKMFLCHGCN DKFHGGGSSE HRRRDLRCYT GCPPAKDFAV MWGFRVMDDD DDVSLEQSFR MVKPKVQREG GFILEQILEL EKVQLREENG SSSLTERGDP
201: SPLELPKKPE EQLIDLPQTG KELVVDFSHL SSSSTLGDSF WECKSPYNKN NQLWHQNIQD IGVCEDTICS DDDFQIPDID LTFRNFEEQF GADPEPIADS
301: NNVFFVSSLD KSHEMKTFSS SFNNPIFAPK PASSTISFSS SETDNPYSHS EEVISFCPSL SNNTRQKVIT RLKEKKRARV EEKKA
101: HKMFLCHGCN DKFHGGGSSE HRRRDLRCYT GCPPAKDFAV MWGFRVMDDD DDVSLEQSFR MVKPKVQREG GFILEQILEL EKVQLREENG SSSLTERGDP
201: SPLELPKKPE EQLIDLPQTG KELVVDFSHL SSSSTLGDSF WECKSPYNKN NQLWHQNIQD IGVCEDTICS DDDFQIPDID LTFRNFEEQF GADPEPIADS
301: NNVFFVSSLD KSHEMKTFSS SFNNPIFAPK PASSTISFSS SETDNPYSHS EEVISFCPSL SNNTRQKVIT RLKEKKRARV EEKKA
Arabidopsis Description
B-box zinc finger family protein [Source:TAIR;Acc:AT1G68190]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.