Factsheet for AT1G68190.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04213	Canola	nucleus	66.23	75.89
CDY07393	Canola	nucleus	66.23	47.57
VIT_01s0011g04240.t01	Wine grape	nucleus	34.81	37.53
KRH35868	Soybean	nucleus	35.84	31.51
KRG90917	Soybean	nucleus	35.58	31.28
Solyc04g007470.2.1	Tomato	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	34.03	27.58
PGSC0003DMT400015373	Potato	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	34.55	27.2
AT5G48250.1	Thale cress	nucleus	23.38	24.13
AT3G07650.1	Thale cress	nucleus	22.6	23.39
AT4G15250.1	Thale cress	nucleus	17.92	20.91
AT3G21880.2	Thale cress	nucleus	19.48	20.38
AT2G33500.1	Thale cress	nucleus	18.96	18.16
AT2G47890.1	Thale cress	nucleus	15.32	17.77
AT1G28050.1	Thale cress	nucleus	19.74	17.55
AT3G02380.1	Thale cress	nucleus	15.32	17.0
AT2G24790.1	Thale cress	nucleus, plastid	11.95	15.65
AT5G15850.1	Thale cress	nucleus	14.29	15.49
AT5G24930.1	Thale cress	nucleus	14.55	15.47
AT5G15840.1	Thale cress	nucleus	14.29	14.75
AT5G57660.1	Thale cress	nucleus, plastid	11.95	12.96

Protein Annotations

MapMan:15.5.1.2	EntrezGene:843148	UniProt:A0A1P8ASJ7	ProteinID:AAG52592.1	ProteinID:AEE34762.1	EMBL:AK117800
ProteinID:ANM59632.1	ProteinID:ANM59633.1	ArrayExpress:AT1G68190	EnsemblPlantsGene:AT1G68190	RefSeq:AT1G68190	TAIR:AT1G68190
RefSeq:AT1G68190-TAIR-G	EnsemblPlants:AT1G68190.2	Unigene:At.35557	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0046872	InterPro:IPR000315	RefSeq:NP_001321976.1	RefSeq:NP_001321977.1	RefSeq:NP_176986.1
PFscan:PS50119	PANTHER:PTHR31717	PANTHER:PTHR31717:SF40	SMART:SM00336	TMHMM:TMhelix	UniParc:UPI000848367A
InterPro:Znf_B-box	SEG:seg	:	:	:	:

Description

B-box zinc finger family protein [Source:TAIR;Acc:AT1G68190]

Coordinates

chr1:+:25558794..25561248

Molecular Weight (calculated)

43770.9 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.440

Length

385 amino acids

Sequence
(BLAST)

001: MKKLLKTDRR SFCHQSLIFL VLLSGGIFYM LCIIIIENME RVCEFCKAYR AVVYCIADTA NLCLTCDAKV HSANSLSGRH LRTVLCDSCK NQPCVVRCFD
101: HKMFLCHGCN DKFHGGGSSE HRRRDLRCYT GCPPAKDFAV MWGFRVMDDD DDVSLEQSFR MVKPKVQREG GFILEQILEL EKVQLREENG SSSLTERGDP
201: SPLELPKKPE EQLIDLPQTG KELVVDFSHL SSSSTLGDSF WECKSPYNKN NQLWHQNIQD IGVCEDTICS DDDFQIPDID LTFRNFEEQF GADPEPIADS
301: NNVFFVSSLD KSHEMKTFSS SFNNPIFAPK PASSTISFSS SETDNPYSHS EEVISFCPSL SNNTRQKVIT RLKEKKRARV EEKKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.