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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 5
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G006340.1
HORVU0Hr1G021050.5
HORVU1Hr1G064780.1
HORVU2Hr1G080020.6
HORVU3Hr1G029440.1
HORVU3Hr1G029450.1
HORVU3Hr1G068000.2
HORVU3Hr1G068010.1
HORVU3Hr1G068020.2
HORVU3Hr1G090040.1
HORVU4Hr1G014760.3
HORVU4Hr1G072020.1
HORVU6Hr1G049080.7
HORVU7Hr1G068990.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 HORVU1Hr1G064780.1 AT5G48380.1 19616764
AT1G34210.1 HORVU3Hr1G090040.1 AT5G48380.1 19616764
AT1G34210.1 HORVU4Hr1G014760.3 AT5G48380.1 19616764
AT1G71830.1 HORVU2Hr1G080020.6 AT1G71830.1 11397085
AT1G71830.1 HORVU6Hr1G049080.7 AT1G71830.1 11397085
AT1G71830.1 HORVU7Hr1G068990.2 AT1G71830.1 11397085
AT1G71830.1 HORVU2Hr1G080020.6 AT1G71830.1 16621602
AT1G71830.1 HORVU6Hr1G049080.7 AT1G71830.1 16621602
AT1G71830.1 HORVU7Hr1G068990.2 AT1G71830.1 16621602
AT1G71830.1 HORVU0Hr1G021050.5 AT2G33500.1 16473966
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 15592873
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 15592873
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 15592873
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 16473966
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 16473966
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 16473966
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 16621602
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 16621602
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 16621602
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 17693538
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 17693538
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 17693538
AT1G71830.1 HORVU4Hr1G072020.1 AT3G54840.1 16621602
AT1G71830.1 HORVU3Hr1G068000.2 AT4G39400.1 16473966
AT1G71830.1 HORVU3Hr1G068010.1 AT4G39400.1 16473966
AT1G71830.1 HORVU3Hr1G068020.2 AT4G39400.1 16473966
AT2G13790.1 HORVU3Hr1G068000.2 AT4G39400.1 17600708
AT2G13790.1 HORVU3Hr1G068010.1 AT4G39400.1 17600708
AT2G13790.1 HORVU3Hr1G068020.2 AT4G39400.1 17600708
AT2G13790.1 HORVU1Hr1G064780.1 AT5G48380.1 19616764
AT2G13790.1 HORVU3Hr1G090040.1 AT5G48380.1 19616764
AT2G13790.1 HORVU4Hr1G014760.3 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G223700.3 Wheat plasma membrane 99.52 99.52
TraesCS6A01G203600.2 Wheat cytosol 96.5 99.51
TraesCS6D01G186900.2 Wheat plasma membrane 94.59 98.34
EES07030 Sorghum plasma membrane 91.4 91.69
Zm00001d016928_P010 Maize plasma membrane 91.08 91.37
Zm00001d050868_P004 Maize plasma membrane 88.69 89.41
GSMUA_Achr7P17210_001 Banana cytosol 68.63 87.42
GSMUA_Achr2P14850_001 Banana plastid 84.71 85.12
VIT_07s0031g01410.t01 Wine grape plasma membrane 83.76 84.29
GSMUA_AchrUn_... Banana plasma membrane 84.55 84.29
KRH35013 Soybean plasma membrane 83.44 83.97
VIT_18s0164g00070.t01 Wine grape plasma membrane 83.28 83.81
KRG91762 Soybean plasma membrane 83.28 83.81
Bra003911.1-P Field mustard plasma membrane 75.96 83.54
GSMUA_Achr7P11620_001 Banana plasma membrane 85.35 83.36
CDY36679 Canola plasma membrane 82.32 83.25
GSMUA_Achr10P... Banana plasma membrane 82.8 83.07
Solyc04g072570.2.1 Tomato extracellular 83.12 82.99
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 68.15 82.63
CDX96350 Canola plasma membrane 82.17 82.56
KRH70218 Soybean endoplasmic reticulum 82.01 82.53
AT1G71830.1 Thale cress plasma membrane 81.85 82.24
CDX72833 Canola plasma membrane 81.85 82.24
AT1G34210.1 Thale cress plasma membrane 81.53 81.53
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 67.99 81.33
Bra037006.1-P Field mustard mitochondrion 61.78 81.0
KRH10503 Soybean cytosol, plastid 59.87 80.34
Solyc01g104970.2.1 Tomato plasma membrane 78.34 79.87
HORVU7Hr1G068990.2 Barley mitochondrion 85.51 79.67
PGSC0003DMT400070819 Potato plasma membrane 80.25 79.5
Solyc10g047140.1.1 Tomato plasma membrane 77.55 79.19
Bra016112.1-P Field mustard plasma membrane 76.11 78.75
CDY46116 Canola plasma membrane 75.16 78.28
HORVU2Hr1G080020.6 Barley cytosol 88.22 78.25
CDX72403 Canola plasma membrane 75.0 78.11
CDX68975 Canola plasma membrane 76.11 77.72
Bra011439.1-P Field mustard plasma membrane 64.33 77.69
CDX75351 Canola plasma membrane 76.11 77.6
CDY45042 Canola plasma membrane 75.48 77.45
Bra034562.1-P Field mustard plasma membrane 69.75 77.39
KRH43924 Soybean plasma membrane 75.64 77.11
VIT_12s0055g01160.t01 Wine grape plasma membrane 74.84 77.05
GSMUA_Achr10P... Banana mitochondrion 86.31 74.76
VIT_12s0055g01280.t01 Wine grape plasma membrane 60.35 73.88
AT4G33430.2 Thale cress plasma membrane 76.75 72.81
AT2G13790.1 Thale cress plasma membrane 71.18 72.1
CDY28301 Canola plasma membrane 45.54 72.04
KRH58311 Soybean plasma membrane 70.86 71.66
Bra032128.1-P Field mustard cytosol 54.78 70.64
CDX68299 Canola plasma membrane 79.46 70.38
CDX89615 Canola plasma membrane 67.99 70.0
CDX93126 Canola plasma membrane 67.83 69.84
AT2G13800.3 Thale cress plasma membrane 65.76 68.72
Bra041056.1-P Field mustard plasma membrane 56.37 68.47
CDY48450 Canola plasma membrane 66.72 68.46
VIT_12s0055g01150.t01 Wine grape plasma membrane 64.97 67.11
Bra032125.1-P Field mustard plasma membrane 56.53 66.11
KRH42193 Soybean plasma membrane 64.65 65.91
CDX71165 Canola plasma membrane 64.65 65.7
CDY39690 Canola cytosol 62.74 64.91
KRH58312 Soybean plasma membrane 63.53 64.88
HORVU6Hr1G074570.6 Barley cytosol 35.03 61.11
HORVU4Hr1G029640.2 Barley cytosol 23.73 59.84
Bra013136.1-P Field mustard plasma membrane 54.46 59.17
HORVU7Hr1G083870.7 Barley cytosol 17.04 52.2
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 24.68 52.19
HORVU7Hr1G043030.2 Barley plasma membrane 51.91 52.16
HORVU6Hr1G093140.1 Barley mitochondrion, plastid 22.45 51.65
HORVU3Hr1G016240.5 Barley plasma membrane 51.75 51.26
HORVU6Hr1G072620.29 Barley plasma membrane 52.07 47.39
HORVU1Hr1G006020.20 Barley endoplasmic reticulum, plasma membrane 18.47 47.15
HORVU7Hr1G028160.13 Barley plasma membrane 45.38 46.72
HORVU3Hr1G073960.5 Barley plastid 50.8 43.76
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 48.41 42.88
HORVU7Hr1G044510.5 Barley cytosol 36.47 38.36
HORVU1Hr1G025280.2 Barley mitochondrion, plasma membrane, plastid, vacuole 42.04 36.82
HORVU3Hr1G033790.1 Barley golgi, plasma membrane 19.59 35.34
HORVU4Hr1G060740.1 Barley plasma membrane 31.21 33.22
HORVU5Hr1G000980.2 Barley plastid 27.71 25.89
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A287U4C4
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:HORVU6Hr1G049080EnsemblPlants:HORVU6Hr1G049080.7InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF215InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B474712
SEG:seg:::::
Description
No Description!
Coordinates
chrchr6H:-:298927879..298937642
Molecular Weight (calculated)
68842.5 Da
IEP (calculated)
5.420
GRAVY (calculated)
-0.163
Length
628 amino acids
Sequence
(BLAST)
001: MAAAVLGGGR WRPVVVAVLM VVAGVGHVVA NTEGDALYNL RQSLKDSNNV LQSWDPTLVN PCTWFHVTCN NDNSVIRVDL GNAQLSGVLV SQLGQLKNLQ
101: YLELYSNNIS GPIPAELGNL TSLVSLDLYL NKFTGVIPDS LGNLLKLRFL RLNNNSMSGQ IPNSLTDITT LQVLDLSNNN LSGAVPSTGS FSLFTPISFA
201: NNPLLCGPGT TKPCPGDPPF SPPPPYNPPT PSTQSAGASS TGAIAGGVAA GAALVFAVPA IAFAMWRRRK PEEHFFDVPA EEDPEVHLGQ LKKFSLRELQ
301: VASDNFNNKN ILGRGGFGKV YKGRLADGTL VAVKRLKEER TPGGELQFQT EVEMISMAVH RNLLRLRGFC MTPTERLLVY PYMANGSVAS RLRERQPSEP
401: PLDWDTRRRI ALGSARGLSY LHDHCDPKII HRDVKAANIL LDEDFEAVVG DFGLAKLMDY KDTHVTTAVR GTIGHIAPEY LSTGKSSEKT DVFGYGITLL
501: ELITGQRAFD LARLANDDDV MLLDWVKGLL KEKKVEMLVD PDLQSNYEET EVESLIQVAL LCTQGSPVER PKMSEVVRML EGDGLAERWE EWQKVEVVRQ
601: EAELAPLRND WIVDSTYNLR AVELSGPR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.