Factsheet for Os02t0283800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015971_P004	Maize	plasma membrane	90.77	89.16
VIT_00s0646g00030.t01	Wine grape	cytosol	51.24	89.11
EES04934	Sorghum	plasma membrane	90.77	88.44
VIT_00s0634g00030.t01	Wine grape	cytosol	33.61	86.81
GSMUA_Achr8P23480_001	Banana	plasma membrane	82.37	82.92
VIT_00s0641g00010.t01	Wine grape	cytosol	49.42	82.64
KRH59316	Soybean	plasma membrane	74.96	74.59
KRH43169	Soybean	plasma membrane	74.3	73.93
Solyc11g008960.1.1	Tomato	plasma membrane	72.49	72.85
PGSC0003DMT400041690	Potato	plasma membrane	71.83	72.19
PGSC0003DMT400056093	Potato	plasma membrane	71.5	71.85
Bra028592.1-P	Field mustard	plasma membrane	71.66	71.19
CDX85768	Canola	plasma membrane	71.66	71.19
Solyc03g078520.2.1	Tomato	plasma membrane	71.0	71.0
CDY40089	Canola	plasma membrane	71.17	70.7
AT5G10290.1	Thale cress	plasma membrane	71.17	70.47
KRG97568	Soybean	plasma membrane	70.18	70.3
Bra024369.1-P	Field mustard	plasma membrane	64.58	69.75
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	23.72	69.23
CDY55159	Canola	extracellular, plasma membrane, vacuole	68.86	68.75
CDY08807	Canola	plasma membrane	68.86	68.75
KRH31305	Soybean	plasma membrane	70.51	67.61
AT5G65240.2	Thale cress	plasma membrane	69.03	65.47
Os11t0607200-01	Rice	plasma membrane	57.0	56.91
Os08t0174700-01	Rice	plasma membrane	53.71	52.24
Os04t0457800-01	Rice	plasma membrane	53.38	51.59
Os01t0171000-01	Rice	plasma membrane	47.94	46.34
Os06t0274500-01	Rice	extracellular	47.45	45.0
Os06t0225300-01	Rice	plasma membrane	43.82	43.18
Os02t0236100-01	Rice	plasma membrane	43.49	42.58
Os08t0442700-01	Rice	plasma membrane	45.96	41.15
Os01t0247500-01	Rice	golgi, plasma membrane	18.62	32.29
Os03t0266800-01	Rice	plasma membrane	30.97	31.65
Os12t0638100-01	Rice	plasma membrane	31.96	30.89
Os02t0728500-01	Rice	extracellular, plasma membrane	14.99	28.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4329032	ProteinID:BAD22198.1
ProteinID:BAF08482.1	ProteinID:BAS78137.1	ProteinID:EAZ22603.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	EnsemblPlantsGene:Os02g0283800	EnsemblPlants:Os02t0283800-01	PFAM:PF00069	PFAM:PF08263
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q6K4T4	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000377DE6	RefSeq:XP_015627048.1	SEG:seg	:

Description

somatic embryogenesis receptor-like kinase 4, somatic embryogenesis receptor kinase 4, SERK-like gene 9, bri1-associated receptor kinase 1 (BAK1) homologue 5Similar to SERK1 (Fragment). (Os02t0283800-01)

Coordinates

chr2:+:10634660..10641052

Molecular Weight (calculated)

67662.9 Da

IEP (calculated)

5.441

GRAVY (calculated)

-0.225

Length

607 amino acids

Sequence
(BLAST)

001: MRELRVAVLI IAVSLPSFSA SDRQGDALYD MKQKLNVTGN QLSDWNQNQV NPCTWNSVIC DNNNNVIQVT LAARGFAGVL SPRIGELKYL TVLSLAGNRI
101: SGGIPEQFGN LSSLTSLDLE DNLLVGEIPA SLGQLSKLQL LILSDNNFNG SIPDSLAKIS SLTDIRLAYN NLSGQIPGPL FQVARYNFSG NHLNCGTNFP
201: HSCSTNMSYQ SGSHSSKIGI VLGTVGGVIG LLIVAALFLF CKGRRKSHLR EVFVDVAGED DRRIAFGQLK RFAWRELQIA TDNFSERNVL GQGGFGKVYK
301: GVLPDGTKIA VKRLTDYESP GGEAAFLREV ELISVAVHRN LLKLIGFCTT QTERLLVYPF MQNLSVAYRL RDFKPGEPVL NWPERKRVAI GTARGLEYLH
401: EHCNPKIIHR DVKAANVLLD EDFEPVVGDF GLAKLVDVQK TSVTTQVRGT MGHIAPEYLS TGKSSERTDV FGYGIMLLEL VTGQRAIDFS RLEEEDDVLL
501: LDHVKKLQRE GQLGSIVDRN LNQNYDDEEV EMMIQIALLC TQSSPEDRPS MSEVVRMLEG EGLAERWEEW QQVEVTRRQE YERMQRRFDW GEDSVYNQEA
601: IELSGGR

Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.